Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g05688 ATGGATGTGTTGCGATTAAGTTTTGATGGACTGGAGGAAATGGAAAAAGAAATATTTCTAGATATTGCCTGTTTCTTCAACAGTTATACAGAGAAATATGTGAAGAAAGTTCTAAATTCTTGTGGATTTCATTCTAATATTGGAATGAGAGTTCTCATTGATAAATCACTTCTGACCATTTCAAATGGTCACATTGAAATGCATGATTTGTTGCAAGAGATGGGCAGAAAAACTGTTCAAGAAAATTCACCCAAAGAGCAAAGAAAATGGAGTAGGCTTTGGCTCTACAAAGATTTCTACAATATTATGTTGGCGAATAAGGAAGCAGAAAACATTGAAGCCATAGTTTTGCACCATGCAACAGATGGGAAAGTATTGAGGGCTGAAGCATTAACAAAAATGAGTCGCCTTAGATTGCTCATATTCCATTATTTGAACTTTTCAGGAAGCTTCAATTTTCTTTCCAATGAATTAAGATATGTTGAGTGGCATGGATATCCTTTCATGTATTTACCATCAAGTTTTCAACCAAATGGACTTGTTAAATTGATCTTGAGGCATAGCTGCATCAAACAACTATGGGAAAGCAAGAAGCTAATAGATAAACAAAGACATGTAGAGCATTTGAAGAAGCTTGATATAAGTGAAACTGCTACGCACTCCCAATCAACACCCTCCATCTTCAAATGGCTTAAGTTACCTTTCAATTTCTTCTTTTCCCGATCACAAAAAGATTCAGCTAGTTGTTTGTTGACTTCCTTGCCTAGCTTCTCTTGTTTGCGTGATCTTGATCTAAGTTTCTGCAATCTACACCAAATCCCTGATGCTATTGGAAGTTTACATAGTTTAGAAACCTTAAATTTAATGGGAAACAAGTTTGATAGACTGACTAGTAACCTCAAGGAGCTTTCCAGACTTGTATACTTAAACTTGCAGCATTGCAAGCAGTTGAAAATTTTGCCTGAGCTCCCTTCATGTACTTACATGCCAGAGAGAAGAGAATTTCCTTGGCCTATATCAAGACCAGGATTGTATATTTTCAACTGCCCAAAATTGGGTGAGAGGGAACACAGCAATAGCCTGACATTTTCATGGATGATGCAAGTCCTTCAAGCAAATCAAGAATCCTTTGCCCCCTTTAATGAGATTGAAATGATTATTCCTGGAAGTGAAATACCAAGGTGGTTCAACAATCAGATATTTGTGGCAACTGATGATCAAACTACTACAAGGAATGAATGGGAACCCTATATATGGATAGGTTTTTCAAATACAGGGCGTGGGATAATTGCCAAAATTCCGGTACTTCCTGATAGAGATCTGATCATGGTTGAATCAGATCACATGTGGCTATTCTATTTCTCTCGGAAAGGGTTCCTTCATTTTATAAGTCGTATAACTGGCAAAGCAAGTGAATTGCATGATCTTAATGGCATAGGATTGGCAACTGTTATCTGTGACGGCCAAGGTTTGCATTTGGAGAAAGCAGTTGTAGCTGCAGTTCCATCAAAGATGGATATGCAACAATTAAACCAAACAATGACCCATGGTAGAAGCAACAGTAGTATTCAAATTGATGGTGATTTGTGGATAGGTGGTCCAATCCTTTGTTTGAATAAGGAAGTAGAGCATCAAAAGAAGAATGTTTTGTTCTATCACAGTTCAAAACTAGCAGGAACTTATGGAATACTGATGACCAAGCTGGGAAAACCCATTCGGATTGTAAAGATCACACTTCTTTGTGGGGACTGGCATTCATTCTTGAAATATCTATCTATTGTCACTAAAAGGGATATTTTTCTAAGAGATTCTTCAGGATTTCATTGTTTCTGTAATGGCCAATGCTCATGTAAAGACTACTGGTGA 1866 0.3719 MDVLRLSFDGLEEMEKEIFLDIACFFNSYTEKYVKKVLNSCGFHSNIGMRVLIDKSLLTISNGHIEMHDLLQEMGRKTVQENSPKEQRKWSRLWLYKDFYNIMLANKEAENIEAIVLHHATDGKVLRAEALTKMSRLRLLIFHYLNFSGSFNFLSNELRYVEWHGYPFMYLPSSFQPNGLVKLILRHSCIKQLWESKKLIDKQRHVEHLKKLDISETATHSQSTPSIFKWLKLPFNFFFSRSQKDSASCLLTSLPSFSCLRDLDLSFCNLHQIPDAIGSLHSLETLNLMGNKFDRLTSNLKELSRLVYLNLQHCKQLKILPELPSCTYMPERREFPWPISRPGLYIFNCPKLGEREHSNSLTFSWMMQVLQANQESFAPFNEIEMIIPGSEIPRWFNNQIFVATDDQTTTRNEWEPYIWIGFSNTGRGIIAKIPVLPDRDLIMVESDHMWLFYFSRKGFLHFISRITGKASELHDLNGIGLATVICDGQGLHLEKAVVAAVPSKMDMQQLNQTMTHGRSNSSIQIDGDLWIGGPILCLNKEVEHQKKNVLFYHSSKLAGTYGILMTKLGKPIRIVKITLLCGDWHSFLKYLSIVTKRDIFLRDSSGFHCFCNGQCSCKDYW. 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g05688 621 Gene3D Ribonuclease Inhibitor 106 352 IPR032675 -
Seca3g05688 621 SUPERFAMILY L domain-like 127 327 - -
Seca3g05688 621 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 3 345 IPR044974 GO:0006952
Seca3g05688 621 SUPERFAMILY "Winged helix" DNA-binding domain 2 101 IPR036390 -
Seca3g05688 621 Coils Coil 621 621 - -
Seca3g05688 621 Pfam DYW family of nucleic acid deaminases 543 621 IPR032867 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g05688 Seca-Chr3 115965942 115969405 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g05688 10 323 WRKY Transcription Factor Family AT4G12020 32.416 3.55e-32 131
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g05688 - - cam:101502375 400.979