Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g05648 ATGTCTGAATTAGACGCAGAGATCCCTACTACCTTCGATCCTTTTGCTGAGGCAAATGCTGAGGACTCAGGTGCCGGGTCAAAGGAATACGTGCATATTCGTATACAGCAGCGAAATGGTAGGAAAAGTTTGACAACAGTCCAAGGATTGAAGAAAGAATTCAGCTATAACAAGATACTTAAAGACCTTAAGAAAGAGTTCTGTTGCAATGGCACAGTTGTTCAAGACCCAGAACTAGGACAGGTTATTCAACTTCAAGGTGATCAAAGGAAGAATGTATCTACCTTCCTAGTACAGGTAACTATCACCCCATCTTTGGAGTTTTGCAGTTAG 333 0.4174 MSELDAEIPTTFDPFAEANAEDSGAGSKEYVHIRIQQRNGRKSLTTVQGLKKEFSYNKILKDLKKEFCCNGTVVQDPELGQVIQLQGDQRKNVSTFLVQVTITPSLEFCS. 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g05648 110 Gene3D - 2 107 - -
Seca3g05648 110 PIRSF Transl_init_SUI1_Euk 1 107 IPR005874 GO:0003743
Seca3g05648 110 Pfam Translation initiation factor SUI1 28 99 IPR001950 GO:0003743|GO:0006413
Seca3g05648 110 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 6 101 - -
Seca3g05648 110 CDD eIF1_SUI1 29 102 IPR005874 GO:0003743
Seca3g05648 110 MobiDBLite consensus disorder prediction 1 25 - -
Seca3g05648 110 FunFam Eukaryotic translation initiation factor SUI1 2 108 - -
Seca3g05648 110 NCBIfam translation initiation factor SUI1 7 102 IPR005874 GO:0003743
Seca3g05648 110 SUPERFAMILY eIF1-like 5 104 IPR036877 GO:0003743|GO:0006413
Seca3g05648 110 ProSiteProfiles Translation initiation factor SUI1 family profile. 31 101 IPR001950 GO:0003743|GO:0006413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g05648 Seca-Chr3 114722002 114724434 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g05648 1 102 Eukaryotic Initiation Factors Gene Family AT4G27130 87.255 8.68e-66 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g05648 K03113 - jre:108983673 198.749