Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g05644 ATGAGGGCTATCAAGGAGGCAGTTTCCTCCTACACAATAATAATACCCGTGTTGTTGTTGTTGTTATCGTTGAGTTTTGATGTTTGTCATGGACAAGGCTTTAAGCCGGCGTCTCCGCCACCGGTGCCGGAGCTCGACAGCTGTGATGGTATTTTCTTGACGTACAGTTTGCTTGGGCGGGTGAAGGAATATCCGCACGTGAAAAACATGTCGAAGCAAGCATGGGCGTTTAAAGCAGAGGCTTCGTTGATGAACGTAGGGGATGAGGAGCTTAAAGGGTGGAAGATGTTCATTGGATTTCAGCACAGGGAGATTCTTGTGTCGGCGGATGGCGCTGTTCCTATTGACTCTGAGGATTTTCCGTCCGATGTGAGCAATGGAACCACCCTTGCCGGTAACCCTGTGACGGACTTGAAGACCGCCATTGAGACCGCTGGGGATTATAACCAGATGGCTGTGGGGGTTCAGATGACTGGTACACAGTTTGGCCTCGGTGCTGGTGCTACCCCAATGCCCAAATCTATCAAACTTGTTAATGATGGCTTCAAATGCCCTGGACCTAGTCGTAAAGGGTCGAGAATGTTTGTATGCTGCAGAAAGGACCCGAAAGCCAAGGCTAAGCTAGCCAAGAAAACCAAGTTCCTTCCTCGTCGCTATGGAGATCTAACAATTGCCTACGACGTGCTTCAAGCCTTCCAAACCAACTACTACGCCCAGGTGACCATTGAAAACAACCACCCATTAGGACGTCTTGATCATTGGAATTTGACATGGGAATGGCAGAAAGGAGAGTTCATTTACTCATTGAAAGGAGCTTATGCTCGCATTAAGGACCCTTCTGAGTGCTTATATGGCCCTGCTGGCAAATACTATAGGGACTTGGATTTCTCACAAGTCGCAAACTGTCAGAAAAAGCCTATCCTCTCTGATCTCCCTTCTGAAAAAGCAGAGGATGAGAAGCTTGGAAAACTCCCCTGGTGTTGTAGGAATGGCACTGTCTTGCCTCCCATCATGGACAAGAACAAATCAAAATCCATGTTTCAGTTACAAGTCTTCAAGATGCCACCTGATGACAACAGAACTGCTCTCACCCCACCTATGAAATGGAACATTGATGGGGTTATCAATCCAAAATACACATGTGGACCTCCAATTAGAGTTGACCCACAAGAGTTCCCTGACCCAGCTGGGCTTAGAGCAATTTCCACAGCTGTGGCTAGTTGGCAAATTGTCTGCAACATGACCAAACCAAAGCCTCAACAAAACCGTTGCTGTGTCTCATTCTCAGCATTCTATAATGAATCTGCTATCCCTTGCAACACCTGTGCTTGTGGTTGTGATGAAACAAGGAATTGCAACTCCAAAGCCTCTCCATTGCTTCTTCCACCTGATGCTCTTCTTGTGCCTTTTGTCAACAGAACCTTAAAGGCACGTGCTTGGGCCAAGCTAAAACACTTGCATGTGCCTAGCAAATTGCCTTGTGGAGATAACTGCCCTGTTAGCATCAATTGGCATGTCAGCTCAGACCACAAGGAAGGATGGACAGCTAGGATTACTCTTTTCAACTGGGGTAACAATGCCTTTGATGATTGGTTCACTGGCATCCAGTTTAAGAGGTCTTTTGATGAATTTGAAGATGTGTATTCCTTCAATGGGACTAGAATTCCTGGTATCAAAACCATCTTCTTCCAAGGCCTAAAGGGTTTGAATTACTTGGTTGGAGAAACCAATGGAACCCGTGTTGGGGACCCAAGGGTGCCTGGAAAGCAGCAATCTGTGATTTCTTTCAATAAGAAGCACATTAAAGACTTTGATGTTACACATGATGCGTTCCCTACTAAGGTTTTCTTCAATGGAATGGAGTGTGCAATTCCTCCAATCAGACCTGCCAAAAGTTCAGGGCATAAATCTTCCATCAGTGTCCTTGCTGTCATTTGCACAGCTTTTATGACCTTTTTCCTGATGACAGATCGCTTTTACTGA 1983 0.4604 MRAIKEAVSSYTIIIPVLLLLLSLSFDVCHGQGFKPASPPPVPELDSCDGIFLTYSLLGRVKEYPHVKNMSKQAWAFKAEASLMNVGDEELKGWKMFIGFQHREILVSADGAVPIDSEDFPSDVSNGTTLAGNPVTDLKTAIETAGDYNQMAVGVQMTGTQFGLGAGATPMPKSIKLVNDGFKCPGPSRKGSRMFVCCRKDPKAKAKLAKKTKFLPRRYGDLTIAYDVLQAFQTNYYAQVTIENNHPLGRLDHWNLTWEWQKGEFIYSLKGAYARIKDPSECLYGPAGKYYRDLDFSQVANCQKKPILSDLPSEKAEDEKLGKLPWCCRNGTVLPPIMDKNKSKSMFQLQVFKMPPDDNRTALTPPMKWNIDGVINPKYTCGPPIRVDPQEFPDPAGLRAISTAVASWQIVCNMTKPKPQQNRCCVSFSAFYNESAIPCNTCACGCDETRNCNSKASPLLLPPDALLVPFVNRTLKARAWAKLKHLHVPSKLPCGDNCPVSINWHVSSDHKEGWTARITLFNWGNNAFDDWFTGIQFKRSFDEFEDVYSFNGTRIPGIKTIFFQGLKGLNYLVGETNGTRVGDPRVPGKQQSVISFNKKHIKDFDVTHDAFPTKVFFNGMECAIPPIRPAKSSGHKSSISVLAVICTAFMTFFLMTDRFY. 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g05644 660 PANTHER COBRA-LIKE PROTEIN 7 11 655 - -
Seca3g05644 660 Pfam COBRA-like protein 236 415 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g05644 Seca-Chr3 114626820 114630243 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g05644 4 657 COBRA Gene Family AT3G20580 60.152 0.0 818
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g05644 - - gmx:100789175 1087.79