Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g05640 ATGCATCTGATACCTACAAAAACCCCATTGATGGTCCAGCTTATTGCATCACTCTACTTTCAACATTTCCAGCATTTTGGTTGCAATACCCACTTCCCCCTTCTCAGTTCCTCATTGATTGATATGGCTAACACCATTTTAAGGTCTAATGAAGTAGCTCATGCCTTGGGCTTGTTCTGTCTCCTGATGTTGGTGCAAAGGGGTGATGCCTATGAATTCGTAGTTGGAGGTCAAAAGGGTTGGAATGTTCCTAGTGACCCCAATTCCAATCCTTACAATCAATGGGCAGAAAAGAGCCGATTTCAAATAGGGGACTCCCTAGTGTTCAATTACCCTTCTGGTCAGGACTCAGTAATTCAAGTAAATAGCCAGGACTATGCCAGTTGCAACACTGATGCACATTCTGAAAAGTTCTCTGACGGCCACACAGTCATCAAGCTCAATCAATCTGGACCTCACTTCTTCATAAGTGGAAACAAAAATAACTGTCTCAAGAATGAGAAGCTGGTGGTGATTGTGTTGGCTGACAGGACCAACAGAAACTCAAACACCAACCAAACAAACACTGCTCCTTCTACCTCTCCTTCTCCTTCACCATCATTTTCAACAAAGTCATCAGCTCCTTCACCAGCACCTGCTCAGCAAGATGTAACATCTCCACCACCTGCAGGGACTATGGAGACTCCACCACCTGTTCAGCAAGATGCCACACCTCCATCACCAGGGACTGAGGTGACAAACACAACTCCAGCTCCAGCTCCTGTTAGTGAACCTCCTCCTCCTAATGCTGCTTCTTCATTCTTGGTCAGTTTTGCTGGTTCTGTTGGAGCCTTCATGGCTACTGTTCTGGTTTTATCTTTCTAA 864 0.4525 MHLIPTKTPLMVQLIASLYFQHFQHFGCNTHFPLLSSSLIDMANTILRSNEVAHALGLFCLLMLVQRGDAYEFVVGGQKGWNVPSDPNSNPYNQWAEKSRFQIGDSLVFNYPSGQDSVIQVNSQDYASCNTDAHSEKFSDGHTVIKLNQSGPHFFISGNKNNCLKNEKLVVIVLADRTNRNSNTNQTNTAPSTSPSPSPSFSTKSSAPSPAPAQQDVTSPPPAGTMETPPPVQQDATPPSPGTEVTNTTPAPAPVSEPPPPNAASSFLVSFAGSVGAFMATVLVLSF. 288
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g05640 287 PANTHER BLUE COPPER PROTEIN 71 200 IPR039391 GO:0009055
Seca3g05640 287 MobiDBLite consensus disorder prediction 180 265 - -
Seca3g05640 287 FunFam Early nodulin-like protein 9 71 186 - -
Seca3g05640 287 SUPERFAMILY Cupredoxins 70 174 IPR008972 -
Seca3g05640 287 MobiDBLite consensus disorder prediction 180 222 - -
Seca3g05640 287 ProSiteProfiles Phytocyanin domain profile. 71 175 IPR003245 GO:0009055
Seca3g05640 287 Gene3D - 71 187 IPR008972 -
Seca3g05640 287 Pfam Plastocyanin-like domain 81 165 IPR003245 GO:0009055
Seca3g05640 287 MobiDBLite consensus disorder prediction 223 237 - -
Seca3g05640 287 CDD OsENODL1_like 71 174 IPR041846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g05640 Seca-Chr3 114563015 114564997 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g05640 55 268 Phytocyanin Superfamily AT3G20570 46.512 1.96e-54 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g05640 - - gmx:100788637 304.293