Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g05637 ATGCCCCGAGCAAGTGACCTTCTTTTTGGAGTCTCAATCTTTGCTGAAGCAACAAAGGCTAAAATCATTGATTTTGTACATTCAGCTTTTGATGAGTTGTTGAAGATAGGAGTTGTAGGGAAACCTTTATGGCATTCCCAGGTAGACTATGGATTCGAGATTCTCAATGATATTGAATACTTGAGACAATTTGGTCAGGTTGATACAACACTAAGGGAGATTATGAAGTTAGTTGAGGTTAATGAGCCTCAAACATTGCCAAGCTTTGACTCATTTGGAACTCCGCACCCAACATCAGAGCCAGCTTATGAAGCAGCTTTGGGGATTGAAGCTTCACGTGAAACTGCATTTGTTAACATGAGTCCAATCAGCCTTGTTGAATTACTTATGGATGTGAATCAATGGTCGAGAGTATTTCACAAACTTGTCTCAAGGGCAACGGTTTTGCTAACCTTTTTAGAGGGAGTGGAAGGAAGCTGTGATGGGAAATTGCACGTGATGAACGCAGAATTTCATTTGCCTACAGCTCTTGTACGAAGTCGTGAGTGTTATTTTGCAAGGTACTGCAAGCAGTTGTCTCATGAGAAGTGGGTGGTCGTTGATGTGTCATTAGAGAAATTTTTTCCTTCTCCATCAAACAATTTTCGGAAAAGACCATCAGGCTGTTTCATTACAGGGATGCCTAATGGATTCTCTAAGGTTGTATGGATCGAGCATGTGGAAGCAGATCATAGCCAACTGAGTGATAATTTCAAGCCACTAGTCACCTCTTGTTTGGCCTTTGGTGCACCGCGTTGGATTGCTTCCTTAGTTCGGTACAGTAAATGGTTTGAAAGTCTGAATGCTCCAACAGCTTATGCAGATCATGGGGTTCGTATACCTCAGAGTGGGTGGACAAGTTTCTTGAAACTGGCGGATAGAATGATGAGAACCTTTTGTGTCAATGTGAGTGCTACTACGGACAATCCATGGAGGAGAATAGCTTCATTTGCTGGTGCTACAGATGTGAAATTGATGATTAAGAATGATTTGGAACGTTTTGCGAATAAGCCTCCTGGTACACCGGTGGTTTTCACTACTTCTGTTTGGCTTGAAGTCTCCCCACATCGATTATTCAACTTCCTTCGTCATGAGAGTTCCAGGAGAGAGTGGGACAAGCTTTCACAAACACTTACCATTCAAGAATTCTCATGCATAGTCAAGGACGAACGTTCAGGGAATCGTGTTTCCTTGATGCGAGCAATTACACCTGAGGGCAAGACTGAAATCTTTTATCTGCAAGAGAGTTACACAGACTCCACAGGTTTCTACGTGGTTTATGCTCCACTAGATGAGCAAGCTTTATTAGCTCTTTCAAAAGGATGCAACCCAGACAATGTAATTGTCCTCCCATCAGGGTTTGCTATTCTCCCTGGAGGATTACCAGTAGAGGGTGAAGGAAAAGATAGAGGCACTCACACTGGCACTGGAAGTCTTCTAACTGTTGGATTCAATATCATTGATTGGTCCATCACTAATGAGAAACCTATCACTCTTGAATCAGTTCAAGCCATCTATGGTGTTATTGCAGATACTGTTTCTGCTATAAAGGATGCGGTGCAATATCATAATCGACTCAACAATTGGATGAATGAAGAGTGA 1641 0.4223 MPRASDLLFGVSIFAEATKAKIIDFVHSAFDELLKIGVVGKPLWHSQVDYGFEILNDIEYLRQFGQVDTTLREIMKLVEVNEPQTLPSFDSFGTPHPTSEPAYEAALGIEASRETAFVNMSPISLVELLMDVNQWSRVFHKLVSRATVLLTFLEGVEGSCDGKLHVMNAEFHLPTALVRSRECYFARYCKQLSHEKWVVVDVSLEKFFPSPSNNFRKRPSGCFITGMPNGFSKVVWIEHVEADHSQLSDNFKPLVTSCLAFGAPRWIASLVRYSKWFESLNAPTAYADHGVRIPQSGWTSFLKLADRMMRTFCVNVSATTDNPWRRIASFAGATDVKLMIKNDLERFANKPPGTPVVFTTSVWLEVSPHRLFNFLRHESSRREWDKLSQTLTIQEFSCIVKDERSGNRVSLMRAITPEGKTEIFYLQESYTDSTGFYVVYAPLDEQALLALSKGCNPDNVIVLPSGFAILPGGLPVEGEGKDRGTHTGTGSLLTVGFNIIDWSITNEKPITLESVQAIYGVIADTVSAIKDAVQYHNRLNNWMNEE. 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g05637 546 Pfam START domain 108 272 IPR002913 GO:0008289
Seca3g05637 546 CDD START_ArGLABRA2_like 19 272 - -
Seca3g05637 546 Gene3D - 102 274 IPR023393 -
Seca3g05637 546 SUPERFAMILY Bet v1-like 297 472 - -
Seca3g05637 546 ProSiteProfiles START domain profile. 15 279 IPR002913 GO:0008289
Seca3g05637 546 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 17 534 IPR042160 -
Seca3g05637 546 SUPERFAMILY Bet v1-like 108 277 - -
Seca3g05637 546 SMART START_1 66 276 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g05637 Seca-Chr3 114278230 114293609 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g05637 6 533 Homeobox Transcription Factor Family AT4G04890 42.272 1.69e-121 373
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g05637 K09338 - jre:108992281 480.33