Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g05629 ATGCGTCCTGTGTCCTACATCCTGGCTGGACTTCTCGCAGCATATATCTTAAAAGCCTTAAGCTTTGGAAGACATTCAAGTGTTCGTGAAATTGCATTGATGGTGTTAATGGCATACCTATCCTACATGTTGTCTGAGCTACTCGAACTAAGTGGAATCCTTACTGTTTTCTTTTGTGGAATATTTATGTCACACTATGCATGGCATAATGTGACCGAAATTTCAAGAATCACAACCAGAAACCTTCATATTTCTTTACGTGGGCATGGATGCCCTTGTCATGGAAAAGTGGAAGATGACTCAATTAAGGATTGCCCTTCAACTATGGAGCAGCAGTCTAATATGGTGCTTGGAAATGGTATATCTGTAGTATCGTGGATTGTTAAACCTGTATCATGA 399 0.401 MRPVSYILAGLLAAYILKALSFGRHSSVREIALMVLMAYLSYMLSELLELSGILTVFFCGIFMSHYAWHNVTEISRITTRNLHISLRGHGCPCHGKVEDDSIKDCPSTMEQQSNMVLGNGISVVSWIVKPVS. 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g05629 132 PANTHER SODIUM/HYDROGEN EXCHANGER 7 81 IPR018422 GO:0006812|GO:0015385|GO:0016020|GO:1902600
Seca3g05629 132 Pfam Sodium/hydrogen exchanger family 5 72 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g05629 Seca-Chr3 113986020 113988716 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g05629 9 86 Antiporters AT5G27150 70.513 4.72e-33 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g05629 - - tpra:123918932 120.553