Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g05612 ATGTACCACCGTAGATTCAACGCCCAATCATTATATGTCGCTGACCCAGATGAGCCCGAGCCCGAGCCCATCTCAGAAGCCGGGCCTGCTTCTCCTTCTTCCGGTGATGACACAAAAACTGAAGAACCATCACCCAAAAAAAGGAGGGAGATGAAGAAGAGGGTGGTGACTATACCGATCGGTGACGTGGATGGATCTAAGAGTAAAGGAGAGACATATCCACCGTCTGATTCGTGGGCCTGGAGGAAGTACGGCCAGAAGCCCATCAAGGGCTCCCCTTATCCCAGAGGGGATACTACCGATGCAGTAGTTCAAAAGGGTGTCCCGCCAGGAAGCAAGTTGAGAGAAGCCGTGTGGACCCCACAAAGCTCATCGTCACCTACGCCTACGAACACAACCACTCCCTTCCTCTCCCCAAATCTCATTCCTCCTCCTCCGCCGTCGTCGCCGCCGTCGACGGCGACGCCGCCAGTCCCTCGCTCGCCGAGTCCGCCTCCAAATTTCCGCCGGAGGAGTTGA 519 0.5626 MYHRRFNAQSLYVADPDEPEPEPISEAGPASPSSGDDTKTEEPSPKKRREMKKRVVTIPIGDVDGSKSKGETYPPSDSWAWRKYGQKPIKGSPYPRGDTTDAVVQKGVPPGSKLREAVWTPQSSSSPTPTNTTTPFLSPNLIPPPPPSSPPSTATPPVPRSPSPPPNFRRRS. 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g05612 172 Gene3D WRKY domain 49 107 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca3g05612 172 ProSiteProfiles WRKY domain profile. 76 118 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca3g05612 172 SMART WRKY_cls 75 123 IPR003657 GO:0003700|GO:0006355|GO:0043565
Seca3g05612 172 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 23 97 IPR044810 GO:0003700
Seca3g05612 172 MobiDBLite consensus disorder prediction 39 57 - -
Seca3g05612 172 MobiDBLite consensus disorder prediction 138 166 - -
Seca3g05612 172 MobiDBLite consensus disorder prediction 117 137 - -
Seca3g05612 172 MobiDBLite consensus disorder prediction 1 172 - -
Seca3g05612 172 SUPERFAMILY WRKY DNA-binding domain 71 97 IPR036576 GO:0003700|GO:0006355|GO:0043565
Seca3g05612 172 Pfam WRKY DNA -binding domain 77 96 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g05612 Seca-Chr3 113529373 113532458 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g05612 3 97 WRKY Transcription Factor Family AT3G58710 62.105 7.88e-35 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Seca3g05612 WRKY 5.6e-06 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g05612 - - cam:101504205 176.022