Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g05564 ATGGTGGATTCAATGAAGAAGGTTGCAAATCTTGATGTTGAATTGACTGTTGAAGAGCGAAATTTGCTTTCTGTTGGTTATAAGAATGTGATTGGTGCTCGTAGAGCGTCTTGGAGGATCCTGTCTTCCATAGAGCAAAAGGAAGAAACTAAAGGAAATGAAGTAAATGCGAAACGAATTAAGGAGTATAGGCAGAAGGTTGAAACAGAGCTTTCAAACATCTGTATTGATGTTATGAGAGTTATTGATGAACACCTTATACCTTCAGCTGCAGCTGGTGAATCAACTGTGTTTTACTATAAGATGAAAGGAGACTATTATCGTTATCTGGCAGAATTTAAGACAGGCAATGAGAAGAAGGAGGCTGCTGATCAGTCAATGAAAGCATATGAGTCTGCTACCACTGCAGCAGAGGCTGAATTGCCTCCCACACATCCCATCAGATTGGGTTTGGCTTTGAATTTCTCAGTTTTCTATTATGAGATCTTGAATTCACCAGAAAGAGCCTGTCATCTTGCAAAGCAAGCTTTTGATGAAGCTATTTCAGAGCTTGACACATTGAATGAGGAATCCTACAAAGATAGCACCTTGATCATGCAACTTCTCAGGGACAACTTGACTTTGTGGACTTCTGACATCCCAGAAGATGGAGAAGACTCCCAAAAAGTGAATGGCACTGCCAAGCTTGGTGGCGGTGAGGATGCAGAGTGA 711 0.4135 MVDSMKKVANLDVELTVEERNLLSVGYKNVIGARRASWRILSSIEQKEETKGNEVNAKRIKEYRQKVETELSNICIDVMRVIDEHLIPSAAAGESTVFYYKMKGDYYRYLAEFKTGNEKKEAADQSMKAYESATTAAEAELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDEAISELDTLNEESYKDSTLIMQLLRDNLTLWTSDIPEDGEDSQKVNGTAKLGGGEDAE. 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g05564 236 PIRSF 14-3-3 1 222 IPR000308 -
Seca3g05564 236 Pfam 14-3-3 protein 1 210 IPR023410 -
Seca3g05564 236 Coils Coil 170 190 - -
Seca3g05564 236 PRINTS 14-3-3 protein zeta signature 156 182 IPR000308 -
Seca3g05564 236 PRINTS 14-3-3 protein zeta signature 14 43 IPR000308 -
Seca3g05564 236 PRINTS 14-3-3 protein zeta signature 63 87 IPR000308 -
Seca3g05564 236 PRINTS 14-3-3 protein zeta signature 94 116 IPR000308 -
Seca3g05564 236 PRINTS 14-3-3 protein zeta signature 129 155 IPR000308 -
Seca3g05564 236 PRINTS 14-3-3 protein zeta signature 183 212 IPR000308 -
Seca3g05564 236 SMART 1433_4 1 223 IPR023410 -
Seca3g05564 236 ProSitePatterns 14-3-3 proteins signature 1. 20 30 IPR023409 -
Seca3g05564 236 FunFam 14-3-3 protein epsilon 1 223 - -
Seca3g05564 236 ProSitePatterns 14-3-3 proteins signature 2. 192 211 IPR023409 -
Seca3g05564 236 SUPERFAMILY 14-3-3 protein 2 218 IPR036815 -
Seca3g05564 236 Gene3D - 1 225 IPR036815 -
Seca3g05564 236 MobiDBLite consensus disorder prediction 211 236 - -
Seca3g05564 236 PANTHER 14-3-3 PROTEIN 1 213 IPR000308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g05564 Seca-Chr3 112117484 112120957 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g05564 1 236 14-3-3 family AT2G42590 83.613 2.61e-148 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g05564 K06630 - gmx:547990 449.129