Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g05465 ATGGGGTCTAATGGATTCCTAGGCGTTTTCCTTGTGATCATACCCATGTTGATTCTCAACTCTTCATATCAAGCAACAGCATACAACTTCATCGTTGGTGGCAAGGAAGGGTGGGTGGTGAAGCCTTCTGAAGCCTACAATCACTGGGCTGAGAGAAATAGGTTTCAAGTCAACGACACACTGCATTTCAAATACAACAAAGGATCAGATTCAGTTGCAGTGGTAAATAAGGAGAACTATGATTCGTGCAACCCCAAGAATCCCTTACACGTTATGAACGATGGAGATTCAACGTTCAAATTTGACAAGTCAGGTCCTTTTTTCTTCATCAGCGGCAACGTTGAGAACTGCAAACATGGTCAAAAGCTAATTGTTGTCGTTATGGCTGTCAGACAAAAACAGAGTCAGTCACGTCCTCCTCCGGCTGCACATCCATCTCCGGCAGAAGTTAAATCTCCGGCGGTGCCAGAACCTAGCGTTGCTCCGTCGATCCATGCAGATTCTCCGGCACCATCACCAGCTCATTCGGGTTCTATGAGGTTCAGTGGCTCTGTTGGTGTTGCTTTGGGTTTTACCATTGGGGTGGCTTTGTTGTTCAACACCTTTGCTTAG 612 0.4624 MGSNGFLGVFLVIIPMLILNSSYQATAYNFIVGGKEGWVVKPSEAYNHWAERNRFQVNDTLHFKYNKGSDSVAVVNKENYDSCNPKNPLHVMNDGDSTFKFDKSGPFFFISGNVENCKHGQKLIVVVMAVRQKQSQSRPPPAAHPSPAEVKSPAVPEPSVAPSIHADSPAPSPAHSGSMRFSGSVGVALGFTIGVALLFNTFA. 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g05465 203 ProSiteProfiles Phytocyanin domain profile. 28 129 IPR003245 GO:0009055
Seca3g05465 203 FunFam Early nodulin-like protein 1 27 132 - -
Seca3g05465 203 Gene3D - 28 140 IPR008972 -
Seca3g05465 203 SUPERFAMILY Cupredoxins 27 128 IPR008972 -
Seca3g05465 203 PANTHER BLUE COPPER PROTEIN 26 143 IPR039391 GO:0009055
Seca3g05465 203 CDD OsENODL1_like 28 128 IPR041846 -
Seca3g05465 203 Pfam Plastocyanin-like domain 38 121 IPR003245 GO:0009055
Seca3g05465 203 MobiDBLite consensus disorder prediction 135 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g05465 Seca-Chr3 109385023 109386124 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g05465 9 186 Phytocyanin Superfamily AT4G28365 45.251 2.32e-48 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g05465 - - pcin:129312723 214.542