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Gene search
Sequence information
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Gene
Cds
Cds_length
GC_content
Pep
Pep_length
Seca3g05452
ATGGATCATCCTCAACAAGGAAGTCAACCTTCTCCTTCAACCAAAGTTGAAAGAAGGATCGTAGAGAAAAACAGGAGAAACCAGATGAAGAGTCTCTATTCCAAACTCAACTCTCTCATCCCTACCTATAATCCCAAGGAAGCGTTACCACTGCCTGATCAAATTAACGAGGCGATAGACTACATCAAGAACTTAGAATCAAGGGTGAAGGTGGCGCAGGGGAAGAAAGAAAGCTTAATTGGAAGGAAGAGATCTCGTAGTGACTGTAGCACTTCTGGATCAAAAGGAAGCCTAAAACCGCCAAAAATCGAGATCCATGAAATCGGTTCTTCGCTACAAGTCATTATAATGTGTGGAGTTGATGACAAGTTCATTTTCAGTGAAATTATTCGAATACTTCATGAAGAGAACTTGGAAGTCATCAATGCCAATTCTTCTCTTGCTGGAGATTCCGTTCTTCATATTGTGCACGCAGAGATTCGGCAATCTTCCAGCAATACTCTATTCGGAGCGACCAAAGTAAGTGAGAGATTGAAGAAGTTTGTGAACGGATCTGTTAGTGATTTGGAAATAGAACCTGATTTATGGGATTCTGAAATTGGTACTGTGCCTTGGGGGCTTCTAGATAATATACAGTAA
639
0.41
MDHPQQGSQPSPSTKVERRIVEKNRRNQMKSLYSKLNSLIPTYNPKEALPLPDQINEAIDYIKNLESRVKVAQGKKESLIGRKRSRSDCSTSGSKGSLKPPKIEIHEIGSSLQVIIMCGVDDKFIFSEIIRILHEENLEVINANSSLAGDSVLHIVHAEIRQSSSNTLFGATKVSERLKKFVNGSVSDLEIEPDLWDSEIGTVPWGLLDNIQ.
213
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Annotation information
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Seq ID
Length
Analysis
Description
Start
End
IPR
GO
Seca3g05452
212
MobiDBLite
consensus disorder prediction
76
100
-
-
Seca3g05452
212
MobiDBLite
consensus disorder prediction
1
15
-
-
Seca3g05452
212
Pfam
Helix-loop-helix DNA-binding domain
16
66
IPR011598
GO:0046983
Seca3g05452
212
MobiDBLite
consensus disorder prediction
1
22
-
-
Seca3g05452
212
PANTHER
ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED
12
182
-
-
Seca3g05452
212
FunFam
Transcription factor bHLH162
6
91
-
-
Seca3g05452
212
SUPERFAMILY
HLH, helix-loop-helix DNA-binding domain
11
81
IPR036638
GO:0046983
Seca3g05452
212
Gene3D
-
8
91
IPR036638
GO:0046983
Seca3g05452
212
ProSiteProfiles
Myc-type, basic helix-loop-helix (bHLH) domain profile.
13
65
IPR011598
GO:0046983
Seca3g05452
212
SMART
finulus
19
71
IPR011598
GO:0046983
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Duplication type information
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Gene
Chromosome
Start
End
Duplicated_type
Seca3g05452
Seca-Chr3
109003383
109004265
Dispersed/Wgd
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Functional genes information
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Gene
Gene_start
Gene_end
Function
Ath_gene
Identity(%)
E-value
Score
Seca3g05452
8
184
Basic Helix-Loop-Helix Transcription Factor Gene Family
AT4G20970
39.037
2.59e-33
116
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Transcription factors information
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Regulatory Factors
Family
Gene
Hmm_acc
Hmm_name
E_value
Clan
TF
bHLH
Seca3g05452
HLH
2.2e-08
No_clan
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Pathway information
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Query
KO
Definition
Second KO
KEGG Genes ID
GHOSTX Score
Seca3g05452
-
-
gmx:100817883
266.159
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