Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g05432 ATGGCGTCTGGACCATCCGGTCACGGTAACGGCGGCTCCAAGGGTTTTGATTTTGGTTCCGATGACATCCTTTCTTCATACGAGGACTATACCAACCAGGATTCTTCTAATGGCAGTCACATCGACCCCAGTAAGTTTTTGCAGGATTTTCACATATCAAGGATGACAAAAGCATCAACATATCCTGTTACTGCCTATAGCTCACCTGAAGATTCTTTAAGCCAAGATGTGATTGCGACTGTTGAGAAGAGTATGAAAACATATGCTGACAACCTTATGCGGTTTCTTGAGGGAATCAGCTCGAGGCTGTCACAGTTGGAATTGTATTGTTACAATCTTGACAAATCAATTGGAGAAATGCGATCTGATTTAAATAGTGACCATGAGGAGGCAGATTCAAAACTCAAGTCTCTTGAGAAACATCTTCAGGAAGTACACAGGTCTGTACAAATTTTAAGAGACAAGCAAGAGCTAGCAGAGACTCAGAAAGAATTAGCCAAGCTTCAACTTGTTCAGAAAGAATCATCTTCCTCAAGCCATCCGCAGTCTAATGAGGAAAGATCTTCGCCTTCTGCAATGGATCAAAAAAGAACTGTTAATGCATCTGACACACATAACCAGCAGTTAGCTCTTGCCCTACCTCATCAAGTTGCCTTCCAGCAGCAGCATCTGGTACCCCCTTCTCAAGCTCCAGCTCCAAATGTGACTCAAGCCACTCAACAACCTCATTATTACATGCTGCCCAATCCCCCAGCTATGTCCCAGCTTCCCCAGAATCAGTATCTTCCGTCTGATCCACAGTATCAAAATCCACAATCAACATCATCTCAAGTAACCCAGTCCCTGCCAGTGCAACAATTTTCCCAGTATCAGCAGCAACAGCAACAGCAATGGCCTGGCCCTCAACAGTTACCTCAGCAGGTAGAACCTCCGCAACCACCATCAATGCTGTCACAAATGAGACCCCCCACAACAAATGTTTATACTCCATACATTACAAGCCAAGCTCCAAATCCACCTCCCATGGGAACACTTCCGAACAGCATGCCAATGCAAGTGCCATATTCAGGGATTCCACCCCCAGGATCTAACCGTGGTGATGCCGTGCCATATGGATATAGTGGAACTGGTAGAACAGTTCCACAACAACCTCCACCCCAGCAAATCAAGGGCTCATTTCTAGCACAACCAGGTGTGTATGGAAGTAGTGGAACCCACGCCACACATCCTCCTGCTAGTGCATACATGGTGTATGATGGTGAGGGTGGCAGGGCACATTATCCACCCCAATCTACTACTTTTGCTCAAGCTGGATATCCTCCAACAAGTGCTTCCCTTCAGAGCCCTGCACCACATAATCTTATGGCCCGGAATTCTAGCCAGCCACAATTTATCCGCAGCCATCCCTACAATGAATTGATTGAGAAATTGGCGAACATGGGATTTAGGGGTGATCATGTGGCAAGCGTTATCCAGAGGATGGAGGAAAGTGGGCAACCTATAGATTTTAACTCTCTACTTGACCAGTTGAATGTACATAGTTCAGTGGGTCCCCAGAGGGGATGGTCAAGGTAA 1575 0.4616 MASGPSGHGNGGSKGFDFGSDDILSSYEDYTNQDSSNGSHIDPSKFLQDFHISRMTKASTYPVTAYSSPEDSLSQDVIATVEKSMKTYADNLMRFLEGISSRLSQLELYCYNLDKSIGEMRSDLNSDHEEADSKLKSLEKHLQEVHRSVQILRDKQELAETQKELAKLQLVQKESSSSSHPQSNEERSSPSAMDQKRTVNASDTHNQQLALALPHQVAFQQQHLVPPSQAPAPNVTQATQQPHYYMLPNPPAMSQLPQNQYLPSDPQYQNPQSTSSQVTQSLPVQQFSQYQQQQQQQWPGPQQLPQQVEPPQPPSMLSQMRPPTTNVYTPYITSQAPNPPPMGTLPNSMPMQVPYSGIPPPGSNRGDAVPYGYSGTGRTVPQQPPPQQIKGSFLAQPGVYGSSGTHATHPPASAYMVYDGEGGRAHYPPQSTTFAQAGYPPTSASLQSPAPHNLMARNSSQPQFIRSHPYNELIEKLANMGFRGDHVASVIQRMEESGQPIDFNSLLDQLNVHSSVGPQRGWSR. 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g05432 524 PANTHER RECEPTOR-LIKE KINASE, PUTATIVE (DUF1421)-RELATED 3 523 - -
Seca3g05432 524 MobiDBLite consensus disorder prediction 429 450 - -
Seca3g05432 524 MobiDBLite consensus disorder prediction 244 322 - -
Seca3g05432 524 Pfam UBA-like domain (DUF1421) 470 514 IPR010820 -
Seca3g05432 524 MobiDBLite consensus disorder prediction 252 303 - -
Seca3g05432 524 MobiDBLite consensus disorder prediction 169 203 - -
Seca3g05432 524 MobiDBLite consensus disorder prediction 395 415 - -
Seca3g05432 524 Coils Coil 121 171 - -
Seca3g05432 524 MobiDBLite consensus disorder prediction 304 318 - -
Seca3g05432 524 MobiDBLite consensus disorder prediction 427 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g05432 Seca-Chr3 108571448 108575196 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g05432 77 192 Trihelix Transcription Factor Family AT5G14540 35.345 6.58e-20 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g05432 - - ccaj:109810355 695.271