Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g05379 ATGGCGAACGGGTTGGAGAGAGAGAGTGGGTTCACCATGTTCAGTGATGATGAGCTGAGTGAGGTGAGTGGGGTGAAGCGAGTTGGGGACTTTGTTGAAGTAACGTGTGGGTGTACTAGCCATAGATATGGTGATGCTGTTGGAAGGCTTAGGGTTTTCGTTACTGGGTACCTTGAAATCACTTGTGAATGCACCCCTGGTTGCCAAGAAGAATGCTTGTCTAAATCTTACCTTTTTTTGCAAAATGGTGTTTTACTGTTAGACAAGTTGACTCCTGCTGCGTTTGAGAAACACTCTGGAAGAGAGACAGCCAGGAAATGGAAGAATAATGTGTGGGTAATAGTTAATGGTGAGAAGGTTCCTTTGTTTAAAACAGTGCTGCTGAAATATTACAATCAAGCATCAAGAACTGCTAATGGGTCCCATAGATCCCAAAATGGAAGGGCTTGTCACCGTGATGAGTTTATGCGCTGTACTAGATGTAACAAAGAGCGCAGGTTCCGTCTGAGAACTAAAGAGGAATGCCGCCTTCACCATGATGCTTTGGCAGATCCAAATTGGAAATGTTCTGATCTTCCTTATGACAAGTATGTTCAATCAATCTCTTAA 609 0.4351 MANGLERESGFTMFSDDELSEVSGVKRVGDFVEVTCGCTSHRYGDAVGRLRVFVTGYLEITCECTPGCQEECLSKSYLFLQNGVLLLDKLTPAAFEKHSGRETARKWKNNVWVIVNGEKVPLFKTVLLKYYNQASRTANGSHRSQNGRACHRDEFMRCTRCNKERRFRLRTKEECRLHHDALADPNWKCSDLPYDKYVQSIS. 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g05379 202 ProSiteProfiles SAND domain profile. 17 138 IPR000770 GO:0003677
Seca3g05379 202 PANTHER PROTEIN ULTRAPETALA 1 10 197 IPR020533 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g05379 Seca-Chr3 107092454 107095962 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF ULT Seca3g05379 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g05379 - - gmx:100796203 342.813