Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g05373 ATGCTATCATGGCTTTTGCAGGGAATTCTCCAGGGAAAATCAGCTACCCGACTCACCACTGTTTCATCTCCACTATTTACTGATAATCAAGCTCGTCCCTCACTCAGAGTTCCTATGTCTCGAAAAACGAATTCTAAGATCTGCGGACAAGCATACATATATCATTGGTCTGGCTTTCGAATCCCTGCAAATGCTGAGAAACCAGAGTGGTGGTGGAGGACTTTATCCTGTATTCCCTATCTAATAGCATTGCAGATGTCTGCAACTGGGTTTTATATAGAACCTTTACTTGATAAATTCAAATTATTTCGAAATTTGATTTTTTATATCCCAGGAGCTGTCAACCGATTACCAACCTGGTTCCCGATATTATATTGCTATCTGGCTATTGTGATAGTGGTAAAAAATAAGGACTTACCCCTTGTCTTCAGATTCCATGTAATGATGGGAATGCTATTGGAAATCGCTTTACAGATTGTATGGGTTTCAAGCAATTTCATGCCACTTATACACTTCAAGGGAACATTCGGGATATATTACTGGGCTGGTGTGGCATTGGCGTATATTGTCATAATGATGCAGTGCATAAGGTGTGCTCTTCTTGGTACGTTTGTGAATATCCCAGTTGTTAGTGAATCAGCTTTTCTTCATTCTCTATTTGGTTTAGGAGGATTCCAGCGGCCTTTTTAG 690 0.4014 MLSWLLQGILQGKSATRLTTVSSPLFTDNQARPSLRVPMSRKTNSKICGQAYIYHWSGFRIPANAEKPEWWWRTLSCIPYLIALQMSATGFYIEPLLDKFKLFRNLIFYIPGAVNRLPTWFPILYCYLAIVIVVKNKDLPLVFRFHVMMGMLLEIALQIVWVSSNFMPLIHFKGTFGIYYWAGVALAYIVIMMQCIRCALLGTFVNIPVVSESAFLHSLFGLGGFQRPF. 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g05373 229 Pfam Chloroplast import apparatus Tic20-like 41 214 IPR005691 -
Seca3g05373 229 PANTHER PROTEIN TIC 20-II, CHLOROPLASTIC 11 218 IPR005691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g05373 Seca-Chr3 106928536 106931104 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g05373 60 228 Chloroplast and Mitochondria Gene Families AT4G03320 57.988 7.20e-78 234
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g05373 - - aprc:113869676 380.948