Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g05329 ATGGCTTATGTCACTAAGTATGGCTGCTGGAATTGGAGCCAAATCCCAAGATTTGCGGGTCTGGCAAGGTGTGGAAAGAGTTGCAGACTTAGGTAG 96 0.4792 MAYVTKYGCWNWSQIPRFAGLARCGKSCRLR. 32
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g05329 31 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 31 IPR017930 -
Seca3g05329 31 PANTHER MYB DOMAIN PROTEIN 55 1 31 - -
Seca3g05329 31 Gene3D - 1 31 - -
Seca3g05329 31 SUPERFAMILY Homeodomain-like 2 31 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g05329 Seca-Chr3 105788417 105788618 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g05329 1 31 MYB Transcription Factor Family AT3G28470 67.742 2.21e-10 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g05329 K09422 - cpap:110816992 68.9366