Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g05321 ATGAGGACTGGTGTTCTGTTCTCCCTGCTCTGTTGGCTGCTATGTTCCCAACTATGTTCAGCTGGAGATACGTTGAAATCTGGCGAGAATATAACACAGTACTCGGAAAACCTTGTCTCAGCTGGAAACAAATTTGAACTGGGCTTCTTTTCTTTACCTTTTGGAAATGATAGCACGAGTTCAAAGAAATATTTGGGGATATGGTATCACAACTTGGAACCACAAACAGCTACAGTGGTATGGGTTGCCAACAGAGACTGGCCTGTTGAAGGTTCCAGTGGAGTTTTTCAAATTGCAGAGGATGGAAATCTCGTAGTAGCAGATGCATCGCAAAACTACTGGTCCTCTGGACTTGAAGAGTCCTCATCCAGAAACAGGACAGTGAAGCTCTTGGATTCTGGGAATCTAGTGCTAATGGATGATGATAACTCTGGAATGAGTTACCTGTGGCAGAGCTTCCAACACCCAACAGACACGTTTCTTCCTGGCATGAAAATGAATGCAAATACGACATTGACTTCTTGGAGAAACGACAATGACCCGGGAACTGGGAGCTTCACCTTTAGGCTGGCTCGAAAAAGGAGGCAATACAGAGTATATAACCATTCACAACTTTACTTGGAATTGGATGGAATCAATTCAGAAGTGATGTCTCCTTTGGTACTTGGCTTGTTGGCCAACACCACCTCAAATACGTCAAATTATTCGGGCAAAAGGATCAACTTTCAATCTCGACCTTATAATTATGAGAAATCAAGGCTGTTAATGAATTCCAAAGGGGAGATTCAGTTTTTGAAATGGGCAGATATACAATGGGATATGCTGTGGTGGATGCCAGAGGATGAGTGTGACATACATAACTATTGCGGGAGTTTCAGCAGCTGCAACAAAAATAATGATTGGAGTCGCTGCAAATGTTTACCTGGCTGCATTCGTAGGGTGCACAATAATCCGCGCCAAGGGTGTGTGAGAAAATCTAGGCCGTGTAACTACAATGACAAGAAGATGTTCCTCAACTTAACCAAGATTAAAGCGAGCAACCCAGACCTAACAATCGCAACACAAACTGAAGAAGACTGCAAATATTTATGCCTTAACATATGTTCCATATCCGATTGCCAGGCTTATTCGTATTATTATTCGTCTGTGTTTGACCGTACTTTAGAGGCGGGTACATGCGAGATCTGGGAACGGGATTTACCTACACTTCAAGAGCAGCGAGATAGTGGTCGTGATCTTTCTATCTTGGTTAAAATTTCAGATATAGTGTCGACTGCAAAATCGTGTAAACCTTGTGGCACATATATACTTCCTTATCCACTAAGCACTGGGCTAAACTGTGGAGACCCCATGTACAACAAGTTCAGTTGCTCGGAAGGGGAGGTTATGTTCATGATGAACAGAGGAAAATCATACAGAGTTACTTGGATTGATGAAGCTGCCCGAAAATTTTTCATCCAAACGAATGATTCAGCTTCAAATCGCTGCAATTCCAGTTCCAGCTATCAAACTGACAAGCCTAGTCCTCCATTTAATGTGACTGACTGGTGCTTCAAAGAAAATGAAATAGAGGTCCGTTGGCTACCAGCACCAGAACCGCCCTGTAATAAGTCTATAGACTGCAAGAATTGGCCCCATTCAACATGCAATGCAACAAGTGGAGGAGAAAGCAGGTGCTTTTGCAATTCAAATTATCAGTGGAATGCCTCAAGTTTAAGATGTACCCGAGTAATTATTCAACCATCAAGAAACCATCCAAGTGATCCAACCAACCGACTGCCATTGATTCTGATAGTAATTCTTACGGGCACGATTATCCTGGCATGCACAATAGCATTTGCTTATTTGCGGAGAAAGAAAATAGCCCATAAGCTCGATAGGAAAAGCATTCAAACTCAGGAGGGCTTTTATGATAGTGGAAGACATGTGAAAAGTTTGATTGACTTAGGAATTTTAGAAGATAAAGACAGTGAAGGAATTGATGTACCCTATTATACTTTTGGAAGCATTCTAGCAGCTACAGATAATTTCTCAAATTCAAACAAGCTTGGACAAGGAGGTTATGGGCCTGTCTATAAGGGAACGTTTCCGGGAGGACAGGAAATGGCTATAAAGAGGCTTTCAAGTGTTTCAACTCAAGGCCTACAGGAATTCAAAAATGAGGTTGTTTCAATTGCCAAACTTCAACATCGGAACCTTGTTAGACTTAGGGGCTATTGCATCAAAGGAGATGAAAAAATCTTACTGTATGAATACATGCCAAACAAGAGCTTGGACTCATTTATATTTGGTTAG 2295 0.4179 MRTGVLFSLLCWLLCSQLCSAGDTLKSGENITQYSENLVSAGNKFELGFFSLPFGNDSTSSKKYLGIWYHNLEPQTATVVWVANRDWPVEGSSGVFQIAEDGNLVVADASQNYWSSGLEESSSRNRTVKLLDSGNLVLMDDDNSGMSYLWQSFQHPTDTFLPGMKMNANTTLTSWRNDNDPGTGSFTFRLARKRRQYRVYNHSQLYLELDGINSEVMSPLVLGLLANTTSNTSNYSGKRINFQSRPYNYEKSRLLMNSKGEIQFLKWADIQWDMLWWMPEDECDIHNYCGSFSSCNKNNDWSRCKCLPGCIRRVHNNPRQGCVRKSRPCNYNDKKMFLNLTKIKASNPDLTIATQTEEDCKYLCLNICSISDCQAYSYYYSSVFDRTLEAGTCEIWERDLPTLQEQRDSGRDLSILVKISDIVSTAKSCKPCGTYILPYPLSTGLNCGDPMYNKFSCSEGEVMFMMNRGKSYRVTWIDEAARKFFIQTNDSASNRCNSSSSYQTDKPSPPFNVTDWCFKENEIEVRWLPAPEPPCNKSIDCKNWPHSTCNATSGGESRCFCNSNYQWNASSLRCTRVIIQPSRNHPSDPTNRLPLILIVILTGTIILACTIAFAYLRRKKIAHKLDRKSIQTQEGFYDSGRHVKSLIDLGILEDKDSEGIDVPYYTFGSILAATDNFSNSNKLGQGGYGPVYKGTFPGGQEMAIKRLSSVSTQGLQEFKNEVVSIAKLQHRNLVRLRGYCIKGDEKILLYEYMPNKSLDSFIFG. 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g05321 764 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 7 762 - -
Seca3g05321 764 Pfam D-mannose binding lectin 78 171 IPR001480 -
Seca3g05321 764 Gene3D Phosphorylase Kinase; domain 1 653 752 - -
Seca3g05321 764 Gene3D - 16 154 IPR036426 -
Seca3g05321 764 ProSiteProfiles Bulb-type lectin domain profile. 16 151 IPR001480 -
Seca3g05321 764 CDD B_lectin 38 156 IPR001480 -
Seca3g05321 764 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 181 IPR036426 -
Seca3g05321 764 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 642 752 - -
Seca3g05321 764 ProSiteProfiles Protein kinase domain profile. 677 764 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca3g05321 764 FunFam Receptor-like serine/threonine-protein kinase SD1-8 17 153 - -
Seca3g05321 764 SUPERFAMILY Protein kinase-like (PK-like) 661 763 IPR011009 -
Seca3g05321 764 Pfam S-locus glycoprotein domain 247 310 IPR000858 GO:0048544
Seca3g05321 764 ProSiteProfiles PAN/Apple domain profile. 329 420 IPR003609 -
Seca3g05321 764 PIRSF SRK 1 437 IPR024171 GO:0004674
Seca3g05321 764 PIRSF SRK 529 764 IPR024171 GO:0004674
Seca3g05321 764 SMART blect_4 29 156 IPR001480 -
Seca3g05321 764 Pfam Protein tyrosine and serine/threonine kinase 680 762 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g05321 Seca-Chr3 105062612 105067729 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g05321 665 763 Receptor kinase-like Gene Family AT4G23320 67.677 3.68e-37 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Seca3g05321 B_lectin 2.8e-30 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g05321 - - gmx:100807185 845.884