Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g05302 ATGGGCGATGGAGGTTTCGCATGCATGCCTTTGCAGTATATTATGGAGAGGTTACCGAATGCCGAGAAGACAATTTGCGGAGGCAAGAGTGGGAATGGCTTCAATTCCAAGTTGCTCAAGTTTGCTGACAGCGAGAGGAAGAAGATGAAGGCCAGGAAAGAGGAGCCAGCGAGGAAGAGTGAATTGGGGTTGGACAGATTGAGCAAGAGAACCAGCAGCGATATTGAGAATGGTGAAATCTGCGCGGACAAGGTGCAGAAGGAAGAAGTGGAAGAGGGTGAATTGGGCACCATGAAGTGGCCCAGAAGTGACCTGGAAAATGGGGAGTTCGTGCCAGAGAATGGTGAGATTGTGAGTGACAAGTGGAAAACAAGGGAGCTGGAGAAGGGGGAGATTCATTCTGGGAAATGGAGAAAAGAGGACGTAGAAAGAGGGGAGATAGTTACTGAGAAGGGTAGGAAAGGAGAAGCTGAAAAAGGAGAATATGGGTCGTGGAGAGGTATGAAGGATGACATCGAGAAGGGAGAATTCATACCTGATAGATGGTATAAGGGAGACATGGGGAAGGACGATTATGGTAACAGTAGAATCCGCAGGTACCATTCAGGAAGGGAAAAAGGGTGGAAAACTGAACGTGAACGCTCACCCCCTTCTGGGAGATATACAGGTGATGATTTTTTTAGAAAGAAAGAATTTAATAGAGGTGGGGGTCAGCATGCTAAAAGTTCTCCCAGGTGGGAGAGTGGACAGCAGAGGAATGTAAGGATCAGTTCAAAGATTGTAGATGACCAGAAAAATGTACACAGCAATGGTACTAAGGACCATACACGAGATTACACTTCTGGTAGTCGTTTAAAGAGGTTTGGCAATGATTCTGACAGCTGTGAGTGGAAGCATTCTGCTGATTTTACTGGTTTAAAAAGCAGAAGGCTTTCTGATGATAGCTATCGTCATGTTCATTCAGAGAACTATTCTCGTCGCTCTGTGGAGCGGTCTTACAGAAATAATAATTCCACAAAAGTATCTGCAGAAAAGTACTCTTCTAGGAATCATGAATCTTCTATGTCTGCAAGACCAGCTTATGACAGGCATGGACGCAGCCCTGGTCATTCTGAGCGGTCCCCACGAGACCGAGGTAGGTATTATGATAATAGAGATCGCACTCCATTGCGTCGATCACCTTGTGGCCGTGACAGATCCCCATATAGCCGGGAGAAATCCCCCCATGGCCGGGAAAGGTCCCCTTATATGAGGAACTGGGATAGAAGCCGCCAGCATGATCATAAATTGAGAAGTCCAACATGTGCTGAGCAGTCACCACAAGATCGGGGCTGGCGTCATGTTCGCAGGGACCGTACTCCAAATTTAGTAGAAGGATCCCCCCATGATCGAACTAGGAAAGATAGTCATCAAGAAACAAGTTGTAAAACCTTATCAAGTGAAAAATATAGCTCCCAAAATACTTGCAAGGATCATGAAGATAAGCCCATTCAAAGGGAGTCAAATTGTTCAGGTACAGAATCTCAAGGTGAAAGAATTGTGCAAAATATGAATGAGCCTATTGAGAAAGACATATGCAGTCAGCCTGTAAAGGAACAGCAGTCCTGCAGCCCAGCTATTAGCTGCAAAGAATCTCCTCGCATGGAACCACCTCCTGAGGAGCTTCCTTCGATGGAAGAAGATATGGACATTTGTGATACCCCTCCACATGTACCTGTGGTGACAGATTTGTCATCAGGGAAATGGTTTTATCTTGATTATGGGGGTGTAGAAAATGGACCTGCTAAATTATGTGATATCAAGGTCCTTGTTGATGAAGGGGTACTAATGTCAGATCACTTTATCAAGCACTTAGATAGTGACAGGTGGTTAACAGTTGAAAATGCAGTGTCACCATTGACCGCTCCGAGTTTTCCGTCGGTTGTGTCAGATACCATAACTCAGCTGGTAAATCCTCCAGAAGCTCCTGGTAATCTTTTGGCAGATACTGCAGATATTATTCAATCTGGTCCTGCAAATTATCAGGAAATACCAGCCCCCTCACCGCAGCCACCAGCATGCCCTAATGACAGTGTGCTTACATCTGAACATTTGGACGACCTCCACATTGATGAAAGAGTTCGAAATCTGTTAGAGGGGTATGATGTCATTCCTGGAATGGAACTTGAGGCAATAAAAGAAGCTTTGCAAATGAATTTTGAATATGCAAAAGGAGAGGGATTTGGAGACTATGAAGGTTTTCCTTGGCATGTTTCCTATCTTAAGGAAGATCATGATTCAAGTACCGAGTTAGCATCAAGAGATTCTGAATCTGAGTTAAGTATGTCCTGTGACAAAGATAATGGATTTGCCTTTGGCATTCCTAGTGACTGGTTTTCCACCCGTTGGTCATGCAAGGGTGGTGACTGGAAGAGGAATGATGATGCCCAAGATAGATATTCTAGGAGGAAACTTGTCCTGAATAATGGTTTTCCATTATGTCAAATGCCAAAGTCTGGATGTGAAGATCCTCGATGGCCTCAAAAAGATGACTTGTATTTTCCTTCTCAAAGCAAGAGGCTTGATCTCCCTCTATGGGCTTTTTGTGCTGATGAGCGGGTTGATTGCAGTGCTGCAAGCAGATCTGTTCAAAGTAAGCCTGCTTCTGTGAGAGGAGTGAAGGGAAATGTTCTTTCAGTGGTAAGGATAAATGCATGCGTGGTCAAGGACCAGGGATCATTGGTGTTTGAGTCTCGCCACAAGACCCGCGGCAAGGATAGGCACCATTCAAGGTCAACTCGGCCTTTATCTTCAACCAGTGATAGTAAGAGATCATCAGCTGAAGAAGATTCTCAGTCAAAAGCTCTTAGTGATCATGGTTCTTGCTGGAGCATGGAATTCATCAGCATCCCTAAAGACCACCTCTGTACTGTCCATGAGTTACAATTACATTTGGGTGACTGGTATTACCTTGATGGTTCTGGCCGTGAAAGAGGACCTTCATCATTTTCGGAGCTACAGTGTTTAGTAGATCAAGGAATTATAAAAAAGCATAGCAGTGTGTTCCGGAAAAGTGATAAAATCTGGGTTCCTATTACCTCTGTCACAGAAAATTCTGATGTTGGTCTCACAAGCCACCAAAAAAGCAGTTCAACATCTGGTGCATGCTCTGAACTTACATCAAAGCGAACTCAAGGTGTTTCATATGGTGAACCTTCAAATTCAAGTTTGTTCAACAGCATGCACCCTCAGTTTGTTGGTTACACTCGCGGGAAGCTACATGAATTGGTAATGAAATCATACAAGAGCCGGGAGTTTGCTGCGGCTATAAATGAGGTTTTAGATCCCTGGATTAATGCAAGACAACCAAAGAAAGAAATCGAGAAACAAATATATTGGAAATCAGAAGGTGATGTACGTGCTGCCAAAAGAGCCCGGATTCTGGTTGATGATAGTGAAGAAGACATTGATTGGGAAGATGGTGATGTTACTATTGAGAAGGATGAATCCACTTTTGAGGATCTATGTGGTGATGCTACTTTCCCTGAAGAAGAAATTGGTATTACTGAATCTGATGTGGGAAGCTGGGGCTTATTGGATGGTCAGATTTTGGCACGAATCTTCCATTTTTTGAGATCTGATTTCAAGTCCCTTGTCTTTGCATCACTGACTTGCAAGCATTGGAGAGCTGCTGTAAGGTTTTATAAAGAAGTTTCAATACAGGTCAATTTGTCATCCTTAGGTCATTCCTGCACTGATACCATGCTGTGGAACATTATGAATGCTTATGAGAAAGACAAGATCAATTCTATAATTCTCACGGGTTGTGTCAATATTACGGCTCACATGCTTGAGAAAATTCTTCTTTCATTTCCTGGTTTATGTACAATAGACATTAGAGGATGCAGTCAGTTTGGAGAGCTAACTTCTAAATTTGACAATTTGAAATGGATCAAGAGCCGAAGTTCACGCATGACTAGAATTGCTGAGGAGCCCCATAAAATAAGAAGCCTTAAACATATAACAGAGCAAGGTTCATCTGTTTCCAAGTCTAGCAATTTAGGCATAGATGATTTTGGACAATTAAAGGATTATTTTGAAAGTGTGGATAAGAGAGACACGGCGAAGCAGTTATTCCGCCAAAACTTATACAAGCGGTCCAAATTATATGATGCTAGAAGGTCCTCTTCCATTCTATCTAGGGATGCTCGCACAAGACGTTGGGCAATTAAGAAATCTGAAAGTGGTTATAAGAGGATGGAGGAATTCCTTGCTTCAAGACTAAAGGAAATTATGAAGACGAACTCCTGTGACTTTTTTGTACCAAAGGTTGCTGAAATTGAGGCTAAAATGAAAAGTGGTTACTACAGTAGCCGAGGGTTGAGCTCTGTCAAAGATGACATAAGTAGAATGTGCCGTGATGCAATAAAAGCAAAGAATCGGGGTGATGTTAGTGACATGAATCATGTTATCACATTATTTATTCAGCTTGCAACACGGCTGGAAGAGAGTTCCAAGTCATGGGACAATGGCTTGCCAGCAGTGATCTCCTCTACATCCTCAAAGTATAAAAAGAATAGATTAGTGAATGAAAGGAAGTATAGGAGTAATGGAACACATGGTGGTTTGGATAAGAAATTTATGGACTCAGAAAGTGAAACGTCTGATGACTTTGATAGGTCTTACGAAGATGGCAAGAGTGTCAGTGATACTACAACCACTGACACTGAAAGTGACCAAGAAGGTCTACTTAGGGAGTCAAGAGGGGACGGATACTTCACACCTGAGGAAGGTTTGGATTTCATAACTGATGATCGTGAATGGGGTGCTCGCATGACAAAAGCAAGCCTGGTTCCTCCAGTTACAAGGAAATATGATATCATTGATCAATATGTCATTGTAGCTGACGAGGAGGATGTGCGAAGGAAGATGCGGGTTTCATTACCAGATGACTATGCTGAGAAGCTGAGTGCACAAAAGAATGGCACTGAGGAGTCAGATATGGAACTTCCTGAAGTAAAAGACTTCAAACCTAGAAAGCAGCTCGGAAATGAGGTTATTGAGCAAGAAGTTTATGGAATTGATCCTTATACCCATAATCTTTTGCTTGATTCTATGCCAGAGGAGTTAGATTGGTCTCTGCAGGAGAAGCATTTGTTCATAGAAGACATGCTCCTTCGAACATTGAATAAGCAAGTTAGAAATTTTACTGGAACTGGAAGCACTCCAATGAGCTACCCTTTGCAGCCTATTATTGAAGATATTAAAAGATGTGCTGAGGAGGACTGTGATGCAAGAACAATTAGAATGTGTCAAGGTATCCTAAAGGCCATGGACAGTCGTCCAGATGACAAATATGTAGCTTATAGAAAGGGTCTTGGTGTTGTCTGCAACAAGGAAGAAGGCTTTGCCCATGATGATTTTGTTGTGGAGTTTCTGGGAGAGGTTTATCCTGTGTGGAAGTGGTTCGAGAAACAAGATGGGATTCGATCTCTGCAGAAAGATAGTAAAGATCCAGCACCAGAATTCTATAACATCTACCTTGAGAGGCCAAAGGGTGATGCTGATGGGTATGACTTAGTTGTTGTTGATGCAATGCACAAGGCTAATTATGCCAGTCGAATATGTCATTCTTGCCGACCTAACTGTGAAGCCAAAGTTACTGCTGTTGATGGTCATTACCAAATTGGTATTTATAGTGTTCGTAAAATTCAATATGGTGAGGAGATCACTTTTGATTACAATTCTGTGACAGAGAGCAAGGAGGAGTATGAAGCATCAGTTTGTTTGTGTGGAAGTCAAGTATGCCGGGGGAGCTATCTGAATCTGACTGGTGAAGGGGCTTTCCAAAAGGTTCTGAAGGACTCACATGGAATTCTTGATCGTCATTATTTGATGCTAGAAGCTTGTGAACTAAACTCCGTGTCTGAAGAGGACTATAATGACCTGGGAAGAGCTGGTTTAGGCAGTTGCTTGCTTGGAGGCCTTCCAGATTGGCTTGTTGCTTATGCTGCTCGCCTTGTGAGATTCATAAATTTTGAAAGAACTCAACTTCCTGAGGAAATTCTAAAGCATAATCTGGAAGAAAAAAGAAAATATTTTTCAGATATTTGTCTTGAAGTTGAAAGGAGTGATGCCGAAGTTCAGGCTGAGGGCGTGTACAACCAAAGGCTTCAGAATCTTGCTGTCACTCTTGATAAGGTAAGGTATGTTATGAGATGTATTTTTGGTGATCCACGGAACGCACCACCTCCTCTTGAGAAGCTCAGTCCTGAAACAATTGTTACCTTCCTCTGGAAAGGGGAGGGTTCATTTGTTGAGGAGCTTCTTCAGTGCATAGCTCCTCATGTGGAAGAAGACATCTTGAATGATCTCAAGTCCAAAATTCATGCTCATGATCCTTCAAGTGCCACAGATATTCGAAAAGAGCTTCGGAGATCCCTTTTATGGTTGAGGGATGAGGTCCGAAATCTTTCTTGTACATATAAATGCCGGCATGATGCTGCTGCTGACTTAATCCATATTTACGCATATACCAAGTACTTCTTTAGAATACGGGATTATCAAACCGTAAAATCACCACCTGTCTATATTAGTCCACTTGACTTAGGTCCCAAGTACACTAACAAGTTGGGAGCAGAATTTCAGGAGTATCAAAAGATATATGGTGAAAATTATTGTCTAGGGCAGCTGATTTTTTGGCATAATCAGAGTAATGCAGACCCAGATCGCAGCTTGGCAAGAGCCAGCAGGGGTTGTTTGTCTTTACCAGACATCAGTTCCTTTTATGCCAAGGCTCAAAAACCATCACGGCAACGGGTTTATGGTCCAAGGACTGTCAGATCTATGCTGGCAAGAATGGAGAAGCAGCCTCAGAGATCTTGGCCCAAAGACCGGATATGGTCATTCAAAAGTTCTCCGAAATTCTTTGGTAGCCCAATGTTAGATGCTGTAATAAATAACTCTACACTGGACAGGGAGATGGCTCATTGGTTGAAGCACAGACCTGCCATATTCCAGGCCATGTGGGACCGTTAA 7017 0.4278 MGDGGFACMPLQYIMERLPNAEKTICGGKSGNGFNSKLLKFADSERKKMKARKEEPARKSELGLDRLSKRTSSDIENGEICADKVQKEEVEEGELGTMKWPRSDLENGEFVPENGEIVSDKWKTRELEKGEIHSGKWRKEDVERGEIVTEKGRKGEAEKGEYGSWRGMKDDIEKGEFIPDRWYKGDMGKDDYGNSRIRRYHSGREKGWKTERERSPPSGRYTGDDFFRKKEFNRGGGQHAKSSPRWESGQQRNVRISSKIVDDQKNVHSNGTKDHTRDYTSGSRLKRFGNDSDSCEWKHSADFTGLKSRRLSDDSYRHVHSENYSRRSVERSYRNNNSTKVSAEKYSSRNHESSMSARPAYDRHGRSPGHSERSPRDRGRYYDNRDRTPLRRSPCGRDRSPYSREKSPHGRERSPYMRNWDRSRQHDHKLRSPTCAEQSPQDRGWRHVRRDRTPNLVEGSPHDRTRKDSHQETSCKTLSSEKYSSQNTCKDHEDKPIQRESNCSGTESQGERIVQNMNEPIEKDICSQPVKEQQSCSPAISCKESPRMEPPPEELPSMEEDMDICDTPPHVPVVTDLSSGKWFYLDYGGVENGPAKLCDIKVLVDEGVLMSDHFIKHLDSDRWLTVENAVSPLTAPSFPSVVSDTITQLVNPPEAPGNLLADTADIIQSGPANYQEIPAPSPQPPACPNDSVLTSEHLDDLHIDERVRNLLEGYDVIPGMELEAIKEALQMNFEYAKGEGFGDYEGFPWHVSYLKEDHDSSTELASRDSESELSMSCDKDNGFAFGIPSDWFSTRWSCKGGDWKRNDDAQDRYSRRKLVLNNGFPLCQMPKSGCEDPRWPQKDDLYFPSQSKRLDLPLWAFCADERVDCSAASRSVQSKPASVRGVKGNVLSVVRINACVVKDQGSLVFESRHKTRGKDRHHSRSTRPLSSTSDSKRSSAEEDSQSKALSDHGSCWSMEFISIPKDHLCTVHELQLHLGDWYYLDGSGRERGPSSFSELQCLVDQGIIKKHSSVFRKSDKIWVPITSVTENSDVGLTSHQKSSSTSGACSELTSKRTQGVSYGEPSNSSLFNSMHPQFVGYTRGKLHELVMKSYKSREFAAAINEVLDPWINARQPKKEIEKQIYWKSEGDVRAAKRARILVDDSEEDIDWEDGDVTIEKDESTFEDLCGDATFPEEEIGITESDVGSWGLLDGQILARIFHFLRSDFKSLVFASLTCKHWRAAVRFYKEVSIQVNLSSLGHSCTDTMLWNIMNAYEKDKINSIILTGCVNITAHMLEKILLSFPGLCTIDIRGCSQFGELTSKFDNLKWIKSRSSRMTRIAEEPHKIRSLKHITEQGSSVSKSSNLGIDDFGQLKDYFESVDKRDTAKQLFRQNLYKRSKLYDARRSSSILSRDARTRRWAIKKSESGYKRMEEFLASRLKEIMKTNSCDFFVPKVAEIEAKMKSGYYSSRGLSSVKDDISRMCRDAIKAKNRGDVSDMNHVITLFIQLATRLEESSKSWDNGLPAVISSTSSKYKKNRLVNERKYRSNGTHGGLDKKFMDSESETSDDFDRSYEDGKSVSDTTTTDTESDQEGLLRESRGDGYFTPEEGLDFITDDREWGARMTKASLVPPVTRKYDIIDQYVIVADEEDVRRKMRVSLPDDYAEKLSAQKNGTEESDMELPEVKDFKPRKQLGNEVIEQEVYGIDPYTHNLLLDSMPEELDWSLQEKHLFIEDMLLRTLNKQVRNFTGTGSTPMSYPLQPIIEDIKRCAEEDCDARTIRMCQGILKAMDSRPDDKYVAYRKGLGVVCNKEEGFAHDDFVVEFLGEVYPVWKWFEKQDGIRSLQKDSKDPAPEFYNIYLERPKGDADGYDLVVVDAMHKANYASRICHSCRPNCEAKVTAVDGHYQIGIYSVRKIQYGEEITFDYNSVTESKEEYEASVCLCGSQVCRGSYLNLTGEGAFQKVLKDSHGILDRHYLMLEACELNSVSEEDYNDLGRAGLGSCLLGGLPDWLVAYAARLVRFINFERTQLPEEILKHNLEEKRKYFSDICLEVERSDAEVQAEGVYNQRLQNLAVTLDKVRYVMRCIFGDPRNAPPPLEKLSPETIVTFLWKGEGSFVEELLQCIAPHVEEDILNDLKSKIHAHDPSSATDIRKELRRSLLWLRDEVRNLSCTYKCRHDAAADLIHIYAYTKYFFRIRDYQTVKSPPVYISPLDLGPKYTNKLGAEFQEYQKIYGENYCLGQLIFWHNQSNADPDRSLARASRGCLSLPDISSFYAKAQKPSRQRVYGPRTVRSMLARMEKQPQRSWPKDRIWSFKSSPKFFGSPMLDAVINNSTLDREMAHWLKHRPAIFQAMWDR. 2339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g05302 2338 MobiDBLite consensus disorder prediction 911 946 - -
Seca3g05302 2338 MobiDBLite consensus disorder prediction 258 329 - -
Seca3g05302 2338 MobiDBLite consensus disorder prediction 330 355 - -
Seca3g05302 2338 MobiDBLite consensus disorder prediction 88 117 - -
Seca3g05302 2338 MobiDBLite consensus disorder prediction 486 500 - -
Seca3g05302 2338 MobiDBLite consensus disorder prediction 356 433 - -
Seca3g05302 2338 SUPERFAMILY SET domain 1783 1931 IPR046341 -
Seca3g05302 2338 MobiDBLite consensus disorder prediction 1572 1589 - -
Seca3g05302 2338 MobiDBLite consensus disorder prediction 45 70 - -
Seca3g05302 2338 MobiDBLite consensus disorder prediction 192 236 - -
Seca3g05302 2338 Pfam SET domain 1849 1908 IPR001214 GO:0005515
Seca3g05302 2338 MobiDBLite consensus disorder prediction 243 257 - -
Seca3g05302 2338 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR3 142 2338 - -
Seca3g05302 2338 MobiDBLite consensus disorder prediction 192 510 - -
Seca3g05302 2338 SUPERFAMILY F-box domain 1183 1226 IPR036047 GO:0005515
Seca3g05302 2338 MobiDBLite consensus disorder prediction 442 475 - -
Seca3g05302 2338 Pfam Protein SET DOMAIN GROUP 2 C-terminal 1919 2338 IPR045606 -
Seca3g05302 2338 MobiDBLite consensus disorder prediction 1523 1589 - -
Seca3g05302 2338 MobiDBLite consensus disorder prediction 537 557 - -
Seca3g05302 2338 ProSiteProfiles SET domain profile. 1765 1908 IPR001214 GO:0005515
Seca3g05302 2338 SMART set_7 1774 1914 IPR001214 GO:0005515
Seca3g05302 2338 CDD SET_SETD2-like 1782 1930 - -
Seca3g05302 2338 MobiDBLite consensus disorder prediction 1034 1061 - -
Seca3g05302 2338 CDD F-box_SF 1196 1226 - -
Seca3g05302 2338 Gene3D SET domain 1741 1939 IPR046341 -
Seca3g05302 2338 MobiDBLite consensus disorder prediction 1523 1559 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g05302 Seca-Chr3 104617811 104632252 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Seca3g05302 SET 5.7e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g05302 K22748 - gmx:100776205 3982.95