Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g05289 ATGGCTTCCTCAAAGCTCTTTACAAATGTTTGCTTCTCATTGAGCTTAGTCCTCCTTCTCCAAACATCTTTTGGAGCCAACCCTCTCTCCCACATCTGTTCAAGCTCTGAGAACTTCACATCCTACAGCCCTTATGAATCAAACTTGAAAACACTCATCAATTCACTTATCTACAAGACTCCTTCAACAGGTTTTGGTATGGGCTCAGTGGGCCAATATCAAAACCAACAAGCATATGGGCTTGCTCTTTGTCGTGGTGATGTGTCACCCTCAGAATGCAAAACTTGTGTCTCTGAGGCAACAAAAGAAATTCTCAATAGCTGCCCATACAACAAAGGTGCCATCATATGGTATGATAACTGCTTGCTCAAGTACTTGGATAAAGATTTCTTTGGCAAAATTGACAACACAAACAAGTTCTCTTTGTTGAATGTGCAAAACGTTAGTGATCCTACCACATTCAATTACATTACCAAGGAATTGTTGAGCTTACTTGCCTATAAAGCTTCTATGGACCCAAAGTTGTATGCAACGGGAGAGCTAAAGATTGGAGGATTAGATAAAGTTTATGGATTAACTCAGTGCACCAGAGACCTTTCTGGCGTTGATTGCAAGAAGTGTCTTGATGATGCAATTAGTGAACTTCCAAATTGTTGTGATGGAAAAAAAGGAGGCAGGGTTGTTGGTGGAAGTTGCAACATCCGATATGAGATTTACCCATTTGTTAAGAGAGTAAATTAA 741 0.4008 MASSKLFTNVCFSLSLVLLLQTSFGANPLSHICSSSENFTSYSPYESNLKTLINSLIYKTPSTGFGMGSVGQYQNQQAYGLALCRGDVSPSECKTCVSEATKEILNSCPYNKGAIIWYDNCLLKYLDKDFFGKIDNTNKFSLLNVQNVSDPTTFNYITKELLSLLAYKASMDPKLYATGELKIGGLDKVYGLTQCTRDLSGVDCKKCLDDAISELPNCCDGKKGGRVVGGSCNIRYEIYPFVKRVN. 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g05289 246 FunFam Cysteine-rich receptor-like protein kinase 25 138 241 - -
Seca3g05289 246 ProSiteProfiles Gnk2-homologous domain profile. 136 241 IPR002902 -
Seca3g05289 246 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 38-RELATED 10 243 - -
Seca3g05289 246 ProSiteProfiles Gnk2-homologous domain profile. 27 130 IPR002902 -
Seca3g05289 246 Gene3D - 26 130 IPR038408 -
Seca3g05289 246 Gene3D - 136 241 IPR038408 -
Seca3g05289 246 Pfam Salt stress response/antifungal 146 238 IPR002902 -
Seca3g05289 246 Pfam Salt stress response/antifungal 33 126 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g05289 Seca-Chr3 104428462 104429202 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g05289 29 243 Pollen Coat Proteome AT4G20670 43.750 8.37e-52 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g05289 - - gmx:100527155 397.512