Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g05274 ATGGGAAGTCAGAGTTACTTCAAGGTTCTGATTCTTTTTCTTTCAGCATTGATTGCATCAACTCATGCTCAACTGGAGATAGGATTTTATGTTAAGAGCTGCCCAAAAGCTGAGCAGATTATTTTGAACTTTGTTCATCAGCATATCCACAATGCTCCATCACTAGCAGCTGCTTTAATAAGAATGCATTTTCATGACTGTTTTGTAAGGGGATGTGATGCATCAGTGCTTTTGAACTCTACAACAAACCAAGCTGAAAAGAATGCTCCTCCAAATCTCACTGTCAGAGGCTTTGATTTCATTGACAGAATAAAGAGCCTTGTTGAAGCTGAATGCCCTGGTGTTGTCTCTTGTGCTGACATAATAGCTTTGGCTGCCAGAGACTCTATTGTAGCCACAGTAAGTACTCAATTCGGTGGCCCCTATTGGAAAATTCCAACAGGTAGAAGGGATGGGGTCATCTCTAACTTGGTAGAAGCTAGAAACAACATTCCTGCTCCATTTTCCAACTTCACCACCCTGCAAACACTCTTTGGCAATCAGGGTCTTGATTTAAAAGACTTGGTCCTTCTCTCTGGTGCTCACACAATTGGTGTGTCCCTTTGCTCATCATTCTCAAACCGGTTGTTCAATTTTACTGGTAAGGGTGATCAAGATCCAGCACTTGACAGTGAATATGCAACAAATTTGAAGACTTTCAAGTGCAAGAACATCAATGACAATACCACAATAGTTGAGATGGACCCTGGAAGTCGCAAGACATTTGATCTTGGCTACTATCATCAGGTGGTTAAGAGAAGGGGTCTGTTTGAGTCTGATGCTGCATTGTTGACTAACTCTGTTACAAAGTCTCTGGTCAATCAACTGCTTCAAGGGTCAATTGAAAATTTCTTTGCTGAATTTGCCAACTCCATGGAGAAAATGGGAAGAATTAAAGTCAAGACAGGGACAGAAGGAGAGATCAGGAAGCATTGTGCATTTGTAAATAGCTAA 993 0.4119 MGSQSYFKVLILFLSALIASTHAQLEIGFYVKSCPKAEQIILNFVHQHIHNAPSLAAALIRMHFHDCFVRGCDASVLLNSTTNQAEKNAPPNLTVRGFDFIDRIKSLVEAECPGVVSCADIIALAARDSIVATVSTQFGGPYWKIPTGRRDGVISNLVEARNNIPAPFSNFTTLQTLFGNQGLDLKDLVLLSGAHTIGVSLCSSFSNRLFNFTGKGDQDPALDSEYATNLKTFKCKNINDNTTIVEMDPGSRKTFDLGYYHQVVKRRGLFESDAALLTNSVTKSLVNQLLQGSIENFFAEFANSMEKMGRIKVKTGTEGEIRKHCAFVNS. 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g05274 330 FunFam Peroxidase 165 308 - -
Seca3g05274 330 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca3g05274 330 PRINTS Haem peroxidase superfamily signature 116 133 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca3g05274 330 PRINTS Haem peroxidase superfamily signature 248 263 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca3g05274 330 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca3g05274 330 PANTHER PEROXIDASE 25-RELATED 14 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g05274 330 CDD secretory_peroxidase 24 328 IPR033905 GO:0004601|GO:0042744
Seca3g05274 330 Gene3D - 28 329 - -
Seca3g05274 330 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601
Seca3g05274 330 PRINTS Plant peroxidase signature 262 279 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g05274 330 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g05274 330 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g05274 330 PRINTS Plant peroxidase signature 246 261 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g05274 330 PRINTS Plant peroxidase signature 303 316 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g05274 330 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g05274 330 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g05274 330 PRINTS Plant peroxidase signature 96 109 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca3g05274 330 ProSiteProfiles Plant heme peroxidase family profile. 24 329 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca3g05274 330 Pfam Peroxidase 43 289 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca3g05274 330 ProSitePatterns Peroxidases proximal heme-ligand signature. 187 197 IPR019793 -
Seca3g05274 330 Gene3D Peroxidase, domain 2 165 308 - -
Seca3g05274 330 FunFam Peroxidase 28 176 - -
Seca3g05274 330 SUPERFAMILY Heme-dependent peroxidases 24 329 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g05274 Seca-Chr3 104135089 104137304 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g05274 9 329 Peroxidase AT4G11290 69.350 4.32e-168 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g05274 K00430 - gmx:100803114 555.829