Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g05242 ATGATTTACAAGCAAGATGTTGGAGAACAATTCAGGTTAGAGTATGCATGGAGATTGTTGAAAAATGAACCTAAATGGTCAAATGCGTCAGTTGAAGGAGGTAGCAAAAGAACAAAGATTTCTACAGGTGGGAATTACTCATCCTCTTCTAATCCCGAGTCGCCAATGACCAACGAGTACAACCCAACTTCACCCACTTTGGTTCGTCCAATGGGGACAAAGGCAGCAAAAAGAAAGGGAAAATCTGTAGCACAAGAACCAGCTGCTATCAATGAGGAACTATCTACAGTGACAGCGTTAGAGAAGGAGAAAGTGGCCAGTATACTTGAAATGTCACGTGTCAAGGACGAACAAAACAAGTTGAAGAAACGGGAGTTAGACCTGAAGGAGAGACAACTTGACAGAGAGTTCCTATTCCAGGATACATCTGCAATGACAGAGAGACAACTACAAGATCATGCGATGATATGTAGAATGATAAGGGAAAAACATGGATGGTTGTAG 504 0.4187 MIYKQDVGEQFRLEYAWRLLKNEPKWSNASVEGGSKRTKISTGGNYSSSSNPESPMTNEYNPTSPTLVRPMGTKAAKRKGKSVAQEPAAINEELSTVTALEKEKVASILEMSRVKDEQNKLKKRELDLKERQLDREFLFQDTSAMTERQLQDHAMICRMIREKHGWL. 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g05242 167 PANTHER - 2 162 - -
Seca3g05242 167 Coils Coil 111 131 - -
Seca3g05242 167 Pfam No apical meristem-associated C-terminal domain 10 149 IPR029466 -
Seca3g05242 167 MobiDBLite consensus disorder prediction 28 68 - -
Seca3g05242 167 MobiDBLite consensus disorder prediction 26 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g05242 Seca-Chr3 103158854 103159357 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g05242 2 84 Glutathione S-transferase Gene Family AT5G41240 41.111 7.19e-13 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g05242 - - cam:101491527 195.282