Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g05225 ATGAGCAATGATGTTGATTCTAGTGATAGTGGAGATACTGGTAGTGAGCCTACTACTAATAATGAAACAAATGAGCCATTAATGATGGATGTTGGAGGTGAGGTCTTTAAGAGGGTAACAGATTTGACTGCTGATGATATACTAGCATTACAGTCTGGTTCTCAAAAGGAAGCATATGTATTTTACAATGAATATGCTAAAGCTCATGGATTTGTGGTAAGGAAAGACGAGGTAAAGAATGATGTTAGGGTGAACATTGTGATGCGGCAATTTGTATGCAATAGGGAAGGACTAAGAAATAAAAAACAATTAATGAGACTTCGAATTCGCTTTAATCGAAAGAAATCCAAATGGAGAGTGGTCTCCTTTGTGAAGGCCCATAACCATGAGTTAACCCCTTCTAGGTATGTGCATTTACACTCTGCTTATCGTAAGTTGTCAGATGGAGATAAGGCTCAGGTAGATAACTTACATACACATGGTGTGAGAACATGTCACATTATGGGGTATATGTTGGCTCAGAAGGGGGGATACAACAATCTTGGTTTTTCAAGAAAGGATGTGTACAACTATATTGATAGTAAGGCTCGTGGTAAGATAAAGGATGGAGATGCACTTACTGCCCTTAGTTATTTGAAAGGTAGGGGGCACATGACCCCACACTGTTTGCAGAATTTAGGGCTAATGACAAAGGTAAACTGA 702 0.3903 MSNDVDSSDSGDTGSEPTTNNETNEPLMMDVGGEVFKRVTDLTADDILALQSGSQKEAYVFYNEYAKAHGFVVRKDEVKNDVRVNIVMRQFVCNREGLRNKKQLMRLRIRFNRKKSKWRVVSFVKAHNHELTPSRYVHLHSAYRKLSDGDKAQVDNLHTHGVRTCHIMGYMLAQKGGYNNLGFSRKDVYNYIDSKARGKIKDGDALTALSYLKGRGHMTPHCLQNLGLMTKVN. 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g05225 233 MobiDBLite consensus disorder prediction 1 26 - -
Seca3g05225 233 PANTHER OS01G0519700 PROTEIN 54 212 - -
Seca3g05225 233 MobiDBLite consensus disorder prediction 1 27 - -
Seca3g05225 233 Pfam FAR1 DNA-binding domain 61 105 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g05225 Seca-Chr3 102681933 102682688 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca3g05225 FAR1 1.5e-09 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g05225 - - ccaj:109792835 248.054