Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g05192 ATGTCACTGCCACCGGTGCCGCCACCGTCGTCGCTGGCAACTCCGTTAGCCTCACCGCCGACAGAGCTCCCGGTACGTCAGATTCCGGGAAGCTACGGGTGGCCGCTACTAGGCCCGTTGTCGGATCGGCTGGACTATTTCTGGTTCCAGAAGCCAGAGAGCTTCTTCAGGAACCGAATGGAGAAGTACAAGAGTAGCGTGTTCCGCACCAATGTTCCTCCTTCGTTCCCCTTCTTCATGAACGTGAACCCAAACGTCATCGCCGTCCTCGATTGCAAGTCTTTCTCGCACCTCTTCGACTTGGACCTCGTCGACAAGAAGGACGTTCTCGTCGGTGACTTTGTCCCCAGCGTTGCCTTCACCGGAAACATCAGGGTCGGTGTTTACCAGGACATTACTGAACCTCAACATTCTAAGGCAAAGAAGTTCAGCATGGACATCTTGAAACGAAGCTCGGGCATATGGGTATCAGAACTGGTATCGAACCTGGACAAAATGTGCGATAACATAGAAGCAACACTGTCAAAATCCACATCCGCAAGCTACCTATTCCCTCTGCAGCAATTTCTCTTCACGTTCCTCTGTAAAGTCCTCGTCGGTGCCGATACTTCTCGCGACCCCAAAATCGCTGAGTCAGGCTTCGCCATGCTTAACCGCTGGCTCGCCCTCCAGCTCCTTCCCACTGTCAGCATTGGCGTCCTCCAACCCCTTGAAGAAATCTTCCTCCATTCCTTCACATACCCTTTCTTCCTCGTCAGTGGAGACTACAATAACATCTACAACTTCGTCAAACAAGAAGGGAAGGAAGTGATTAAAAGGGGTGTAATAGAGTTTGGGTTGAGCGAAGAAGAAGCCATCCATAACTTGCTTTTCGTTCTGGGCTTCAACGCGTTCGGTGGGTTTTCAATTTTCCTCCCAGGTTTGATAGACAACATAGCGAGTGACTCCACTGGTTTGCAAGAGAGGCTGAGGAAGGAAGCAAGGGAGAAGGGCGGGTCAACTCTGGGGTTTGACTCGGTGAAAGAGATGGATCTGATTCAGTCGGTGGTTTACGAAACTCTGCGGCTGAACCCGCCGGTTCCGCTGCAATACGGGCGAGCCAGGAAGGATTTCCGGCTGAGTTCTTATGACTCGGCGTTTCAAGTGAAGAAGGGCGAGTTGCTGTGCGGGTACCAGAAGCTGGTGATGAGGGACCCGGTTGTGTTTGAAGAACCGGAAAGTTTCAAACCGGACCGGTTCACTACGGAGAAAGGGGCTCAGTTGTTGGATTACTTGTATTGGTCTAATGGACCCCAAACCGGAACTCCCAGTGTCTCCAACAAACAGTGTGCGGGTAAGGACGTTGTGACCCTCACTGCGGCTTTGATTGTGGCTTATTTGCTTCGCAGGTATGATTCCATTAAAGGGGATGCCACTTCAATCACTGCCCTTCAAAAGGCCAAATGA 1446 0.5166 MSLPPVPPPSSLATPLASPPTELPVRQIPGSYGWPLLGPLSDRLDYFWFQKPESFFRNRMEKYKSSVFRTNVPPSFPFFMNVNPNVIAVLDCKSFSHLFDLDLVDKKDVLVGDFVPSVAFTGNIRVGVYQDITEPQHSKAKKFSMDILKRSSGIWVSELVSNLDKMCDNIEATLSKSTSASYLFPLQQFLFTFLCKVLVGADTSRDPKIAESGFAMLNRWLALQLLPTVSIGVLQPLEEIFLHSFTYPFFLVSGDYNNIYNFVKQEGKEVIKRGVIEFGLSEEEAIHNLLFVLGFNAFGGFSIFLPGLIDNIASDSTGLQERLRKEAREKGGSTLGFDSVKEMDLIQSVVYETLRLNPPVPLQYGRARKDFRLSSYDSAFQVKKGELLCGYQKLVMRDPVVFEEPESFKPDRFTTEKGAQLLDYLYWSNGPQTGTPSVSNKQCAGKDVVTLTAALIVAYLLRRYDSIKGDATSITALQKAK. 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g05192 481 Gene3D Cytochrome P450 23 480 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g05192 481 FunFam Allene oxide synthase, chloroplastic 23 481 - -
Seca3g05192 481 PANTHER CYTOCHROME P450 26 23 464 - -
Seca3g05192 481 CDD CYP74 57 473 - -
Seca3g05192 481 PRINTS E-class P450 group IV signature 343 359 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g05192 481 PRINTS E-class P450 group IV signature 380 394 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g05192 481 PRINTS E-class P450 group IV signature 443 461 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g05192 481 PRINTS E-class P450 group IV signature 396 414 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g05192 481 Pfam Cytochrome P450 319 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g05192 481 SUPERFAMILY Cytochrome P450 24 466 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g05192 Seca-Chr3 102223125 102232299 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g05192 101 481 Cytochrome P450 AT4G15440 60.417 2.75e-174 493
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g05192 K10528 - gmx:100784395 785.408