Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g05169 ATGGAATTTGACGGTGTTATCTTCTCATTCAACTCCGTTATTGTTAACCGACACTTCCATCGCCATGATGGATCCCTTGATCCGCAAGCTCCGGCGCCGCCTCCTCGCATGGCTTCACCGATCTCGTTCCCTTTTTACGGCATGAATGTGTTGAATTGTTCAGGTTCGGTATTATTTGTGAGGAGACTTTCGTATAAGGATGTTAGAAAGGCAACCGATGGTTTCCACAGAGTCGTTTATAGCAATTCGGAAGTTTGTGCATATGTTGCGAATTTCCGAGAGGGTGGTGGCGTTTGCTTGGTGAAAGAAGTGAAAGATTTTGGTCAAGACAACGACAATTTCCACAGACAAGTGCAATTCTTGGGGCGCTTGCATCATCGCCACCTTCTCTCACTTAAAGGCTTTTCTATGGGACACAATCGCAAGAGACTGCTCATATTTGACAACATAGAAAATGGAAGCTTAAAGGAGCATCTTAATGACCCATTGAAGACTCCCTTAAATTGGAGGACGAGGTTACAGATAGCTAATGGTGTTGTGGCTGCACTGGTAAGCTCAACAAATTTAAGCGTGTCCAAATCTAGTGATGCCTAA 594 0.4444 MEFDGVIFSFNSVIVNRHFHRHDGSLDPQAPAPPPRMASPISFPFYGMNVLNCSGSVLFVRRLSYKDVRKATDGFHRVVYSNSEVCAYVANFREGGGVCLVKEVKDFGQDNDNFHRQVQFLGRLHHRHLLSLKGFSMGHNRKRLLIFDNIENGSLKEHLNDPLKTPLNWRTRLQIANGVVAALVSSTNLSVSKSSDA. 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g05169 197 FunFam Protein kinase superfamily protein 51 148 - -
Seca3g05169 197 Gene3D Transferase(Phosphotransferase) domain 1 50 185 - -
Seca3g05169 197 SUPERFAMILY Protein kinase-like (PK-like) 64 184 IPR011009 -
Seca3g05169 197 PANTHER OS01G0253100 PROTEIN 54 183 - -
Seca3g05169 197 Pfam Protein tyrosine and serine/threonine kinase 99 180 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g05169 Seca-Chr3 101735679 101737264 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g05169 61 183 Receptor kinase-like Gene Family AT3G19300 43.089 1.46e-26 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Seca3g05169 PK_Tyr_Ser-Thr 6.4e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g05169 - - aprc:113853565 211.846