Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g05149 ATGAAGAAGAGTAGAAGAATAGTTGCTGATGGAACAGAGGATGTTACCGTAATAAGAGGAAAATTTTCCACGAAGAAGATGGAGGAGAATGAGAGGAGGAAGCGAAAATGGAGACTTTCTTTGCTCTGTAAAGATCGTAAAGCACACGATGTGGTACCTAGAAAAGCCCTGCTAGCCTTCACTCCTTCCTCCGAGAGCTTCACTTCTTCTTCCTCCAAGCGCGCACGTCCTTCAGCTCCGCCGTACCAGAATCACACCGATGATACTGGAATCACTCTCCCTCAGCTTCTCGCCCTCAATCTCAGGTCAGAGCGTCCTCCCCTCACGTTCTCTGCACTTTGGAATTTCTTTTTGCTTGGTTTGCTTGGATCTTCAGCACAAATAATGGCTTATGTTGGCATAGATCTCAGCTCACCTACTCTTTCTTCAGCCATGCTTAACCTCATTCCATCTTTCACTTTTATACTTGCTCTCATTTTCAGGTTCCCACCCCATCATAGTAGTCATCAGTCACAACATTTCCCACCTGTGAAGGGTATAATAATAGTGGGGCTAGCTGTTGATGCAAGGAATGTTGGGGAACAAGTTGCTATTGATCAGAGACACAGGTGCTGTGCTGTTCTGTGTTAA 630 0.4556 MKKSRRIVADGTEDVTVIRGKFSTKKMEENERRKRKWRLSLLCKDRKAHDVVPRKALLAFTPSSESFTSSSSKRARPSAPPYQNHTDDTGITLPQLLALNLRSERPPLTFSALWNFFLLGLLGSSAQIMAYVGIDLSSPTLSSAMLNLIPSFTFILALIFRFPPHHSSHQSQHFPPVKGIIIVGLAVDARNVGEQVAIDQRHRCCAVLC. 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g05149 209 MobiDBLite consensus disorder prediction 65 88 - -
Seca3g05149 209 PANTHER WAT1-RELATED PROTEIN 97 158 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g05149 Seca-Chr3 101378810 101383516 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g05149 106 161 Nodulin-like Gene Family AT3G28050 55.357 5.80e-15 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g05149 - - gmx:100816194 105.916