Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g05142 ATGATGGGTGACATTCCAACTCTTTTGGCCCATCTCAAGGATGATCACAAGGTTGACATGCATGATGGATGCACCTTTAACCATCGATATGTCAAATCAAATCCACATGAAGTTGAAAATGCCACATGGATGCTAACTTTTTTTAATTGTTTTGGAAGAAATTTCTTCTTGCATTTTGAGGCATTTATGTTGGGCACAACTCCAGTTTATATTGTTTTTTTACGATTTTTGGGTGATGACAATGAGGCAAGTAAATTCAAGTATAGTTTGGAAGTTGGTGCAAATAGCTGCAAACTTATATGGCAAGGAATTCCAAGGAGCATTCGTGATAGTCATAGAAAAGTTCGTGACAGTCAAGATGGACTCATCATTCAGAGGAACCTAGCTCTTTATTTTTATGGTTGGGGTGTTGTTGTACTTGTTGGTGTGCCAAGTAAAGATGATGCATTCAAATCACGACATGGAAAAGCTACATTTTCTGCTTTACCTTATAAGGATTTGGCTGATGTGGTCTTATTAATCCTCATACCCCTAATTTCACCTAGTTCTTCCAAAGGAGGGGTTGGTTTTCAAGCCAAAGCAATAGCTGAATTTGGAGTTGTTTTCCTTTTATTCAATATTGGCCTGAAGCTCTATGTTGAAAGGCTTAGTTCAATGAAGAAATATGTTACTGGTGTGGCTGCTGGATTTGGTTTCAAGTTTTATGAAGATCCCTTTTCTTTTGTTGTGTTCCTCTTTTGGTTTCAAGTTGATATTGGTTGA 762 0.374 MMGDIPTLLAHLKDDHKVDMHDGCTFNHRYVKSNPHEVENATWMLTFFNCFGRNFFLHFEAFMLGTTPVYIVFLRFLGDDNEASKFKYSLEVGANSCKLIWQGIPRSIRDSHRKVRDSQDGLIIQRNLALYFYGWGVVVLVGVPSKDDAFKSRHGKATFSALPYKDLADVVLLILIPLISPSSSKGGVGFQAKAIAEFGVVFLLFNIGLKLYVERLSSMKKYVTGVAAGFGFKFYEDPFSFVVFLFWFQVDIG. 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g05142 253 SUPERFAMILY TRAF domain-like 3 136 - -
Seca3g05142 253 Pfam Seven in absentia protein family 2 133 IPR018121 GO:0005737|GO:0006511|GO:0007275
Seca3g05142 253 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 11 141 IPR008974 GO:0005515
Seca3g05142 253 PANTHER E3 UBIQUITIN PROTEIN LIGASE SIAH 2 133 - -
Seca3g05142 253 FunFam E3 ubiquitin-protein ligase SINAT5-like 13 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g05142 Seca-Chr3 101131415 101132176 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g05142 1 134 C3H Transcription Factor Family AT2G41980 84.328 2.02e-82 247
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g05142 K04506 - gmx:100500061 249.21