Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g05038 ATGGCCATTCTTTCTGTCATGTTTCTTGCTACCAACCTACTCTTCTTCTTCTCTAAAATTTCGTCTGCAACAGATATCTTAGTCCAATCTCAATCACTTCCCGATGGAATGACCCTTGTTTCAAACGATGGAAACTTTGAGTTGGGTTTCTTCAGCCCAGGTAATTCCACAAACCGCTATGTAGGAATCTGGTACAAAAACATACCAGTTAGAACTGTCGTTTGGGTTGCCAACCGTGACAAACCAATCAAATCCAACTCCAGCAAGTTGATCATAACTCCAGAAGGAAACCTCGAACTTCTCAACCAGAACAACACCGTTATTTGGTCAACAAACACAACAACCAATTCATTGAATAACGTAGCACAGCTCTTAGACTCTGGCAACTTGGTCCTAAGAGATGAGAAAGACAACAATCCTGAAAACTACTTGTGGCAGAGCTTTGACTATCCTTCAGACACATTTTTACCAGGAATGAAAGTAGGGTGGGACTTCAAGACAGGCCTTAATAAACGTCTAACTGCTTGGAAAAATTGGGATGACCCTTCCCCTGGTGACTTTACATGGGGTATGGTACCTACCAACAATCCTGAAGCAGTTATGTGGAAGGGCTCAGAAGAGTACTACAGAAGTGGCCCTTCAGATGGCACTAAATTTAGTGGCGACCCATCTTTGCAGTACAATTCACTAGTCAACTACACATTTGTGTCCAATAAGGATGAATTGTATTTTTCATATAGCCTCAATGATAAGTCAGTAATTTCAAGAATTGTCATGAATCAAACAATTTATGCTCGCCAGCGCTTGACATGGAGCAGAGATACTCAAACGTGGAGGATGTCTTCAACATTGCCAAGTGATTACTGTGATAACTATAATCTTTGTGGTTCGTTTGGGATTTGTGTCATTGGTGAAGCCCCTGTTTGTAGGTGCTTAAATGGATTCAAGCCAAAATCTCCCCAAAGATGGAATGAAATGGATTGGAATCAAGGATGTGTGCACGGCGAAAGTTGGAGCTGCAGGGATAAGAATAAGGATGGTTTCCTCAAATTCAGTAACATGAAGGTCCCAGACACTAAAAAATCATGGGTTAATGCAAGTATGACACTTGAGGAATGCAAGGCCAAATGTTGGGAAAATTGTAACTGTACAGCTTTTGCAAATTCAGACATTAGAGGAGAAGGTAGTGGTTGTGCTATTTGGTTCGATGATCTGTTAGATTTGAGACAGATGGCGAATGCAGGGCAAGATCTGTATATAAGATTGGCTGTGTCAGATATAGAAGAAAATCAAGATGCAAATGATGATTCAAAGAGAAAGGTCGTTGTGATCATAACAAGCACTGTTTCATCAATCGTTTTGGTGCTTTTAATTTTCATTTTCATTTTCATGTATTGGAGGAGGAAAACCAAAACTATAGGGGTGAAAACAGAGATCATAACAAGAACGAAAGAAAAGAACGATGAAAGCAAACAAGAAGATTTTGAGCTACCTTTTTTCGACCTTGCTTCAATAGCATGTGCTACAGATCACTTCTCAAATCACAATAAGCTTGGCCAAGGTGGTTTTGGTCCTGTATACAAGGGAACACTACCAGATGGACAGGAAATTGCTGTCAAAAGACTTTCACAAACATCTAAACAGGGATTAAAAGAATTTAAGAATGAGGTTTTGTTATGTGCTAAGCTTCAACACAGAAATCTTGTTAAAGTTCTTGGTTGTTGTATTGAAGAAGATGAGAAATTGCTTATTTATGAATTCATGGCCAACAAAAGCCTAGATTTCTTTCTTTTCGATTCAGCTCGAAGCAAATTTTTAGACTGGCCTAGACGTTTCCACATTATAAATGGAATTGCTCGAGGACTACTTTATCTTCACCAAGATTCAAGACTAAGGATCATACATAGAGATCTTAAGGTAAGTAATGTTTTATTAGACAAGGAGATGAATCCAAAAATTTCAGATTTTGGCTTGGCAAGAATGTGTGGAGATGATCAAGTTGGAGGAAATACAAGCAAAGTTGTTGGTACATTTGGTTACATGGCACCTGAATATGCTTTTGACGGAATATTCTCAATCAAATCTGACGTGTTTAGCTTTGGCATATTACTACTAGAGATAGTAAGTGGCAAGAAAAATAGCAGACTTTTCTTTCCAAACGACTACAATAATCTTATTGGACATGCATGGAGGTTGTGGAAAGAGGGCATTCCAATGCAACTGATTGATGTTAGTTTGGAGGACTCATATATTCTATCTGAAGCCTTACGATGCATTCATATTGGCCTTTTATGTATGCAACATCATCCTAATGATAGGCCAAACATGACATCTATTGTTGCATTATTAAGCGGAGAGAGTACATTGCCTTTTGCCGAAAGAGCCTAA 2388 0.3886 MAILSVMFLATNLLFFFSKISSATDILVQSQSLPDGMTLVSNDGNFELGFFSPGNSTNRYVGIWYKNIPVRTVVWVANRDKPIKSNSSKLIITPEGNLELLNQNNTVIWSTNTTTNSLNNVAQLLDSGNLVLRDEKDNNPENYLWQSFDYPSDTFLPGMKVGWDFKTGLNKRLTAWKNWDDPSPGDFTWGMVPTNNPEAVMWKGSEEYYRSGPSDGTKFSGDPSLQYNSLVNYTFVSNKDELYFSYSLNDKSVISRIVMNQTIYARQRLTWSRDTQTWRMSSTLPSDYCDNYNLCGSFGICVIGEAPVCRCLNGFKPKSPQRWNEMDWNQGCVHGESWSCRDKNKDGFLKFSNMKVPDTKKSWVNASMTLEECKAKCWENCNCTAFANSDIRGEGSGCAIWFDDLLDLRQMANAGQDLYIRLAVSDIEENQDANDDSKRKVVVIITSTVSSIVLVLLIFIFIFMYWRRKTKTIGVKTEIITRTKEKNDESKQEDFELPFFDLASIACATDHFSNHNKLGQGGFGPVYKGTLPDGQEIAVKRLSQTSKQGLKEFKNEVLLCAKLQHRNLVKVLGCCIEEDEKLLIYEFMANKSLDFFLFDSARSKFLDWPRRFHIINGIARGLLYLHQDSRLRIIHRDLKVSNVLLDKEMNPKISDFGLARMCGDDQVGGNTSKVVGTFGYMAPEYAFDGIFSIKSDVFSFGILLLEIVSGKKNSRLFFPNDYNNLIGHAWRLWKEGIPMQLIDVSLEDSYILSEALRCIHIGLLCMQHHPNDRPNMTSIVALLSGESTLPFAERA. 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g05038 795 ProSiteProfiles Protein kinase domain profile. 512 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca3g05038 795 PIRSF SRK 1 794 IPR024171 GO:0004674
Seca3g05038 795 ProSiteProfiles Bulb-type lectin domain profile. 24 145 IPR001480 -
Seca3g05038 795 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 13 774 - -
Seca3g05038 795 Gene3D - 18 148 IPR036426 -
Seca3g05038 795 Pfam Protein tyrosine and serine/threonine kinase 515 782 IPR001245 GO:0004672|GO:0006468
Seca3g05038 795 SUPERFAMILY Protein kinase-like (PK-like) 495 783 IPR011009 -
Seca3g05038 795 Gene3D Phosphorylase Kinase; domain 1 472 587 - -
Seca3g05038 795 CDD STKc_IRAK 518 783 - -
Seca3g05038 795 CDD B_lectin 30 151 IPR001480 -
Seca3g05038 795 Gene3D Hepatocyte Growth Factor 340 420 - -
Seca3g05038 795 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 339 422 - -
Seca3g05038 795 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 588 790 - -
Seca3g05038 795 Pfam S-locus glycoprotein domain 209 319 IPR000858 GO:0048544
Seca3g05038 795 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 182 IPR036426 -
Seca3g05038 795 SMART ntp_6 343 422 IPR003609 -
Seca3g05038 795 Gene3D Transferase(Phosphotransferase) domain 1 588 789 - -
Seca3g05038 795 CDD PAN_AP_plant 339 423 - -
Seca3g05038 795 SMART blect_4 30 151 IPR001480 -
Seca3g05038 795 ProSitePatterns Serine/Threonine protein kinases active-site signature. 633 645 IPR008271 GO:0004672|GO:0006468
Seca3g05038 795 SMART serkin_6 512 783 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca3g05038 795 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 476 587 - -
Seca3g05038 795 ProSiteProfiles PAN/Apple domain profile. 340 423 IPR003609 -
Seca3g05038 795 Pfam PAN-like domain 340 408 IPR003609 -
Seca3g05038 795 ProSiteProfiles EGF-like domain profile. 285 321 IPR000742 -
Seca3g05038 795 Pfam D-mannose binding lectin 72 177 IPR001480 -
Seca3g05038 795 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g05038 Seca-Chr3 98531292 98534830 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g05038 428 790 Receptor kinase-like Gene Family AT4G23190 48.774 1.50e-122 379
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Seca3g05038 PK_Tyr_Ser-Thr 3.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g05038 - - gmx:100786696 1222.22