Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca3g05018 | ATGACTGAATTCAAGAATGAAGTAAAACTCATAGCGAAACTTCAGCACCGGAATCTTGTTAAGCTTATTGGTTGTTGCATTCAGGAAGACAGAATACTGGTTTATGAATACATGACTAACCGTAGCTTGGATTGGTTCATTTTTGATGATACTAAAAGCAAATTGCTAGATTGGCCTAAACGGTTCAACATTATATGTGGAATTGCTAGAGGTCTTCTCTACCTTCATCATGATTCAAGATTAAGGATAATTCATAGAGATCTCAAACCAAGTAATGTTTTACTTGATGACAAGCTTAATCCCAAAATATCAGATTTTGGCATTGCTAGAATTTTTGGAGGAGATCAGACAGAAGGAAATACAAAGAGAGTAGTTGGCACTTATGGCTACATGGCACCAGAATATGCTGTTGATGGGCTCTTTTCAGTGAAATCTGATGTTTTTAGTTTTGGGATTTTGTTGCTGGAGATTATATGTGGAAAGAGAAGTAGAGGTTTTTATCTTGAAAATGACTCTCCTAACCTTGTCACTCATGCATGGAATTTGTGGAAAGAGGGCAGGGCTTTGCAACTGATTGACCCAAACATAGAGGACCCTTGTGTTCTATCAGAGATATTGCGCTGCATCCATGTCAGTCTGTTGTGTGTGCAGCAATATCCAGAAGATAGACCTGTCATGCCTTCTGTGCTTCTAATGTTAGGGAGTGACAGTGAATTGGCTGAGCCAAAAGAGCCTGGTTACTTTGTGAAGAAGGATTCATTTGCAGCAGCTTCCAACTCAGATCGAAGTGATAAGATCTCAACAAATGAAATGACCATCACCTTATTAGAAGCCCGGTGA | 840 | 0.3917 | MTEFKNEVKLIAKLQHRNLVKLIGCCIQEDRILVYEYMTNRSLDWFIFDDTKSKLLDWPKRFNIICGIARGLLYLHHDSRLRIIHRDLKPSNVLLDDKLNPKISDFGIARIFGGDQTEGNTKRVVGTYGYMAPEYAVDGLFSVKSDVFSFGILLLEIICGKRSRGFYLENDSPNLVTHAWNLWKEGRALQLIDPNIEDPCVLSEILRCIHVSLLCVQQYPEDRPVMPSVLLMLGSDSELAEPKEPGYFVKKDSFAAASNSDRSDKISTNEMTITLLEAR. | 280 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca3g05018 | 279 | SUPERFAMILY | Protein kinase-like (PK-like) | 3 | 255 | IPR011009 | - | |
Seca3g05018 | 279 | SMART | serkin_6 | 2 | 233 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca3g05018 | 279 | ProSiteProfiles | Protein kinase domain profile. | 1 | 239 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca3g05018 | 279 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 38 | 241 | - | - | |
Seca3g05018 | 279 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 83 | 95 | IPR008271 | GO:0004672|GO:0006468 | |
Seca3g05018 | 279 | Gene3D | Transferase(Phosphotransferase) domain 1 | 39 | 247 | - | - | |
Seca3g05018 | 279 | Gene3D | Phosphorylase Kinase; domain 1 | 1 | 38 | - | - | |
Seca3g05018 | 279 | Pfam | Protein tyrosine and serine/threonine kinase | 2 | 226 | IPR001245 | GO:0004672|GO:0006468 | |
Seca3g05018 | 279 | Pfam | Domain of unknown function (DUF3403) | 236 | 279 | IPR021820 | GO:0004674 | |
Seca3g05018 | 279 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 2 | 279 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca3g05018 | Seca-Chr3 | 98015984 | 98017407 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca3g05018 | 2 | 251 | Receptor kinase-like Gene Family | AT4G23230 | 60.317 | 2.32e-109 | 328 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Seca3g05018 | PK_Tyr_Ser-Thr | 4.6e-37 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca3g05018 | - | - | gmx:100775648 | 476.863 |