Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g04995 ATGGGTTTGGAGTTTGGAAGTGAAGAAGACACTTATAATTTCTATTTTTCATATGCCAGATGTCATGGCTTTGCTATGAGGAAAGATGATGTAATTCGGGATGTCAAAGGCAATGTTATCATGCGTCAGTATTTATGTAGCAAAGCTGGGTTGAGGGATAAAAAGCACTTTTTGAGGTTACGAGTTAGGTATGATTATAAGACTGGGAAATTCAAGGTGGTTTCATTTATTGAGTGTCACAACCATGAGTTAACTCCGACAAAATTTGTTCCTTTAATTTCTTCATATCGTGGCTTGTCTGAAGGGGATAAAGCTCAAGTGGATGCACTACATTCTCATGGTGTTAGGCCATGTCAAATAATGGGTTACCTATTGGATCAAAAGGGAGGTTATGCCAATGTAGGATTTTGCAAAAAGGATTTATACAAATACATAGATGAGGTGAAGCGTGGTAAGATTAAAGATGGTGATGCAATGGCTGCATTAAGTTATTTGCAAGGAAAAGCAGACAATGAACCAGTTTTTTTTCTCTAG 534 0.3727 MGLEFGSEEDTYNFYFSYARCHGFAMRKDDVIRDVKGNVIMRQYLCSKAGLRDKKHFLRLRVRYDYKTGKFKVVSFIECHNHELTPTKFVPLISSYRGLSEGDKAQVDALHSHGVRPCQIMGYLLDQKGGYANVGFCKKDLYKYIDEVKRGKIKDGDAMAALSYLQGKADNEPVFFL. 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g04995 177 Pfam FAR1 DNA-binding domain 13 85 IPR004330 -
Seca3g04995 177 PANTHER OS01G0519700 PROTEIN 2 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g04995 Seca-Chr3 97558080 97558667 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca3g04995 FAR1 3.2e-08 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g04995 - - ccaj:109811679 230.72