Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g04991 ATGGACATTCCAACGTTCTTTGTTACAGTTACCTGTATTTTTGTTCCCTTCTTCAAAGTTTGCATAGCAGTCGACTCAATTCGTTTGTTACAGTCCATCAGCTATGGTCAGCAGACACTAGTGTCCCAAGGTGGAAGGTTTGAACTCGGTTTCTTCACTCCCGGTAACTCTAACAAAACTTACCTGGGTATTTGGTACAAGAACATCCCAATTCAGAGAGTGGTTTGGGTCGCAAACAGAGTCAATCCCGTCAACGGTTCAAACGGCATCTTAACAGTTAACAGTACAGGCAGCCTCGTCCTCAGCCATAACGGCACCGTTGTTTGGTACACAACCCCTCAAAAAACAGCACAGAATCCAGTGGCAGTGCTCTTGGACAACGGCAATTTTGTGGTAAGAAATGAGGGAGAAGCAAACCTTGAAGACTATTTGTGGCAGAGCTTTGACCATCCATCAGATACACTGTTGCCAGGGATGAAGTTAGGAACGAACCTCAGAAACAGTCAAGCTTGGCAATTAACATCTTGGAATAGTCCAGTAGATCCATCCCCAGGAGTTGTTTCTTTGGGTGTAGTACTTCATGCTTATCCTGAATATGTTATGATGAAAGGAACAGAGAAGTTCTACCGTCAAGGACCATATAATGGCCTACATCTTAGTGGAGTACCAGCACAACAACCCACCGACTCCTTTTTGAATTCCGAGATTGTCAAGAACAAGGATGAGATCTACTACACATATATCCTCAATAACAATTCTGTCATCTCCTATGTGGTATTAAACCAAACCACTCTTGTTCAGTATGTGTGGCATGAAGAATATCATGATTGGAAGACTTATTATTCAGTCCCCAGAGACAATTGTGACAAGTATGGCCTTTGTGGAGCCTATGGAAATTGCATGATTTCCCAAGGACAGGTCTGCCAATGTTTGAATGGGTTCAGTCCAAAGTCACCACAAGCATGGATCACATCAGATTGGACTCAAGGATGTGTCCGTGATGAACCGTTAAGCTGCAACGATACACACAAGGATGGGTTTGTCAAATTTGAAGGGCTCAAAGTTCCAGATACTACACATACTTGGTTAGATGAAACTATGGAACTAGAGGAATGCAGAGACAAGTGCTTGAATAATTGCTCTTGTATGGCTTATGCAAATTCAAACATCAGTGGAGCAGGTAGTGGCTGTGTCATGTGGTTCGGCGATCTAATTGACATGAGACAATTTGAATATGGTGGGCAAGTTCTTTATATCCGTATAGTAGCTGGTCCAGAATTAGATAGCCACGACAAAAGGGTGACAAAAATAATTGCTACTACCGTTGCTGCAATTTCTGGGGTGCTTATATTTTGCATTTATGTCATATACAGAGTCCGAAGGAAAATTGCAGACAAGTCAAAGATACAAGATAACATTGAAATACATCTAGACGAGCTGGATTTGCCATTATTCGATCTGCTAACAATTACTACTGCCACTCACAACTTCTCGTTGAATAATAAAATTGGACAAGGTGGTTTTGGACCTGTATATAAGGGGAAATTTGTAGATGGGCAAGAGATTGCTGTCAAGAGACTTTCAAGTAGTTCCGGACAAGGAATTTCAGAGTTCTTAACAGAAGTCAAACTGATTGCAAAACTTCAACACAGAAATCTTGTAAAGCTTCTTGGCTGTTGTATTCGAGGAGAAGAAAAAATGCTAGTATATGAATTTATGGCTAATGGTAGCCTTGACTCCTTTATATTTGATCAAATAAAAGGTAAATTGTTGGAGTGGCCCCTACGCTTTAACATAATATTTGGAGTTGCTAGAGGGATTTTGTATCTTCATCATGATTCTCGATTAAGAATCATTCATAGAGATCTCAAAGCAAGTAATGTTTTACTCGATGATAAGTTGAATCCAAAAATATCGGATTTTGGAATGGCCAGATCTTGTGGAGGAGACCAGATTGAAGGAAACACAAATAGAATAGTTGGGACTTATGGATACATGGCACCAGAGTATGCTGTTGATGGGCTATTTTCAATAAAATCTGATGTTTTCAGCTTTGGTATTTTATTGTTGGAGATTATATGTGGGAACAAAAATAGAGCTCTTTGTCATAGAAACCAGACTCTTAACCTTGTTGGTTATGCATGGACACTTTGGAAGGAGGGAAACACTTTACAGTTGATTGACTCAAGAATAAAGGATTCATGTGTTGTCTTAGAAGTATTGCGATGCATCCATGTTAGTCTCTTATGCGTGCAGCAATATCCAGAGGATAGACCAACCATGACCTCAGTAGTACAAATGCTAGGAAGTGAAAAGGAACTGGCTGACCCAAAGAGCCTGGTTTTTTCCCAAGAAATGTTTCTGATGGAGGAAATTCAAGCTCAAATAAAAATGAAATGA 2400 0.4021 MDIPTFFVTVTCIFVPFFKVCIAVDSIRLLQSISYGQQTLVSQGGRFELGFFTPGNSNKTYLGIWYKNIPIQRVVWVANRVNPVNGSNGILTVNSTGSLVLSHNGTVVWYTTPQKTAQNPVAVLLDNGNFVVRNEGEANLEDYLWQSFDHPSDTLLPGMKLGTNLRNSQAWQLTSWNSPVDPSPGVVSLGVVLHAYPEYVMMKGTEKFYRQGPYNGLHLSGVPAQQPTDSFLNSEIVKNKDEIYYTYILNNNSVISYVVLNQTTLVQYVWHEEYHDWKTYYSVPRDNCDKYGLCGAYGNCMISQGQVCQCLNGFSPKSPQAWITSDWTQGCVRDEPLSCNDTHKDGFVKFEGLKVPDTTHTWLDETMELEECRDKCLNNCSCMAYANSNISGAGSGCVMWFGDLIDMRQFEYGGQVLYIRIVAGPELDSHDKRVTKIIATTVAAISGVLIFCIYVIYRVRRKIADKSKIQDNIEIHLDELDLPLFDLLTITTATHNFSLNNKIGQGGFGPVYKGKFVDGQEIAVKRLSSSSGQGISEFLTEVKLIAKLQHRNLVKLLGCCIRGEEKMLVYEFMANGSLDSFIFDQIKGKLLEWPLRFNIIFGVARGILYLHHDSRLRIIHRDLKASNVLLDDKLNPKISDFGMARSCGGDQIEGNTNRIVGTYGYMAPEYAVDGLFSIKSDVFSFGILLLEIICGNKNRALCHRNQTLNLVGYAWTLWKEGNTLQLIDSRIKDSCVVLEVLRCIHVSLLCVQQYPEDRPTMTSVVQMLGSEKELADPKSLVFSQEMFLMEEIQAQIKMK. 800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g04991 799 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 20 148 - -
Seca3g04991 799 FunFam receptor-like serine/threonine-protein kinase SD1-8 468 572 - -
Seca3g04991 799 ProSiteProfiles Protein kinase domain profile. 497 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca3g04991 799 Pfam PAN-like domain 339 407 IPR003609 -
Seca3g04991 799 CDD B_lectin 33 151 IPR001480 -
Seca3g04991 799 Pfam D-mannose binding lectin 74 176 IPR001480 -
Seca3g04991 799 Pfam Protein tyrosine and serine/threonine kinase 498 768 IPR001245 GO:0004672|GO:0006468
Seca3g04991 799 ProSitePatterns Serine/Threonine protein kinases active-site signature. 618 630 IPR008271 GO:0004672|GO:0006468
Seca3g04991 799 SMART ntp_6 342 421 IPR003609 -
Seca3g04991 799 Gene3D Transferase(Phosphotransferase) domain 1 573 785 - -
Seca3g04991 799 ProSiteProfiles Bulb-type lectin domain profile. 24 145 IPR001480 -
Seca3g04991 799 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 573 776 - -
Seca3g04991 799 ProSiteProfiles PAN/Apple domain profile. 339 423 IPR003609 -
Seca3g04991 799 SMART blect_4 31 151 IPR001480 -
Seca3g04991 799 SMART serkin_6 497 768 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca3g04991 799 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 8 759 - -
Seca3g04991 799 Pfam S-locus glycoprotein domain 209 318 IPR000858 GO:0048544
Seca3g04991 799 CDD PAN_AP_plant 336 421 - -
Seca3g04991 799 SUPERFAMILY Protein kinase-like (PK-like) 474 768 IPR011009 -
Seca3g04991 799 Gene3D Phosphorylase Kinase; domain 1 457 572 - -
Seca3g04991 799 Gene3D - 20 148 IPR036426 -
Seca3g04991 799 CDD STKc_IRAK 503 768 - -
Seca3g04991 799 PIRSF SRK 1 797 IPR024171 GO:0004674
Seca3g04991 799 SUPERFAMILY alpha-D-mannose-specific plant lectins 74 182 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g04991 Seca-Chr3 97264736 97268069 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g04991 434 770 Receptor kinase-like Gene Family AT4G23230 53.709 1.02e-114 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Seca3g04991 PK_Tyr_Ser-Thr 5.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g04991 - - gmx:100812007 1031.94