Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g04986 ATGGTGGAACTGAAGCAGAGGATCCTAACCTCTCTCTCCAAGCTTTCAGACAGAGACCGTGTCGTCTCTACATGGGCTAGTGTAGAAAGTGTTAGCGTTCCATCTTCTCAATGGCGATTCTACTGTTCTCTACCCTCCACCAACAAGCTCTTTGTTGGAGGTCCCTCTCTATCTCTCTCTATTCGCCTCTTGTTATGCCCAATCAGGACCTGTATTAACACTGATAGTGTTTCAGGGCTGTCATGGTCAGTCGATGAGAAATCTCTCAAAGACGCTTTCTCTTCGTTCGGAGACGTCACTGAAGATTTTGTTGTTCCGAGAATGTACTTTTGGGGTTTTGAAGGATGCTGTTGGGTGGGTAGTGTTATGATTTGTCATGTATGCTTGTGTGATTCTCAGCTTGCCATAGTTGACTTGGTGAAGGGAGAACCCAATATTTCTTACATCTGTTCAAGATACTATCGAGCCCCTAAACTTATATTTGGTGCCACTGAATATACAACTGCCATAGATATATGGTCAACTGGTTATGTGATGGCTGAGTTGCTTCTTGGACAGGCAGCTAGGAGGAATATACCCATCTTAATTGATGCAGAAAGGCCAAGGGAAGGGTTGGATGATCTCCTGAAATTAGCTGATTATGTAGTATGCTCAGTGAAGTTTCCATAG 669 0.4395 MVELKQRILTSLSKLSDRDRVVSTWASVESVSVPSSQWRFYCSLPSTNKLFVGGPSLSLSIRLLLCPIRTCINTDSVSGLSWSVDEKSLKDAFSSFGDVTEDFVVPRMYFWGFEGCCWVGSVMICHVCLCDSQLAIVDLVKGEPNISYICSRYYRAPKLIFGATEYTTAIDIWSTGYVMAELLLGQAARRNIPILIDAERPREGLDDLLKLADYVVCSVKFP. 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g04986 222 Pfam Protein kinase domain 139 187 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca3g04986 222 SUPERFAMILY RNA-binding domain, RBD 77 119 IPR035979 GO:0003676
Seca3g04986 222 PANTHER GLYCOGEN SYNTHASE KINASE-3 ALPHA 127 187 - -
Seca3g04986 222 Gene3D Transferase(Phosphotransferase) domain 1 116 214 - -
Seca3g04986 222 SUPERFAMILY Protein kinase-like (PK-like) 126 188 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g04986 Seca-Chr3 97148278 97151035 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g04986 113 184 Core Cell Cycle Gene Families AT1G18040 32.184 3.70e-09 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSK Seca3g04986 Pkinase 1.1e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g04986 K03083 - aew:130754922 98.9821