Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g04968 ATGGGTTCACAGCCAGATATAAATCCTAACACGAGATCAATCCTTGTGGATTGGTTGATAGAAGTGCATCGTAAATTTGAACTCGTATCAGAGACTCTCTATCTGGCCATAAATATTGTTGACCGATTCCTGTCCATGAAGGCTGTACCTAGAAAGGAACTTCAGCTGGTTGGTATCAGCTCAATACTGATAGCATCCAAATATGAAGAGATATAG 216 0.4028 MGSQPDINPNTRSILVDWLIEVHRKFELVSETLYLAINIVDRFLSMKAVPRKELQLVGISSILIASKYEEI. 72
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g04968 71 PANTHER CYCLINS 2 71 IPR039361 -
Seca3g04968 71 FunFam G2/mitotic-specific cyclin 1 71 - -
Seca3g04968 71 Gene3D - 3 71 - -
Seca3g04968 71 Pfam Cyclin, N-terminal domain 2 71 IPR006671 -
Seca3g04968 71 ProSitePatterns Cyclins signature. 12 43 IPR006671 -
Seca3g04968 71 SUPERFAMILY Cyclin-like 3 71 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g04968 Seca-Chr3 96776680 96776895 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g04968 1 71 Core Cell Cycle Gene Families AT3G11520 69.014 7.46e-31 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g04968 K21777 - gmx:100801274 122.479