Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g04962 ATGTATGGCATATCAAGCAGGTTGGTAGAGAAGAGTGATGTTTACAGCTTTGGAGTTGTTCTTTTGGAGATAATCACAAGTCAACTAGCTATATCAAAAACGCATGAGAAGATTCACATAAGTGAATGGGTTAGTTCCATGGTTTCTAATGGAGATATTAAAAATATTGTTGACTCAAGATTACATGAAAATTTTGAGACTATCTCTGTCTGGAAAGCTGTTGAAATAGGAATGGCTTCTATGTCCACCCTGCCAGAAGGCCAAACATGA 270 0.3704 MYGISSRLVEKSDVYSFGVVLLEIITSQLAISKTHEKIHISEWVSSMVSNGDIKNIVDSRLHENFETISVWKAVEIGMASMSTLPEGQT. 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g04962 89 PANTHER OS07G0107800 PROTEIN-RELATED 2 83 - -
Seca3g04962 89 SUPERFAMILY Protein kinase-like (PK-like) 10 69 IPR011009 -
Seca3g04962 89 Gene3D Transferase(Phosphotransferase) domain 1 2 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g04962 Seca-Chr3 96603651 96603920 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g04962 8 82 Receptor kinase-like Gene Family AT1G51890 57.333 1.28e-25 96.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Seca3g04962 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g04962 - - gmx:100779474 122.479