Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g04934 ATGAGTGTATTATCAGTAATGAGGAGTTTGAGGTCAGAAGTTGATGCAGGAAACATCAAACCCTACTGTTTTGTGGAGATTAATGGTCTGAAATTGGCATCACCAGAGAATATTTATAAGGTCATATATGAGGCATTAAATGGACACAGAGTCAGCTGGAAAAAGACTCTCCACCTGCTAAATGAGAGGTTTGTAGAGGGGAAGAAAACTGGAGAAGAGGCTGACAGGCCATGTATTTTGCTAATAGATGAACTTGATCTTCTTGTGACCAGAAACCAGTCGGTTTTGTACAATATTCTTGATTGGCCTACTAAGCCACATTCCAAGCTAATTGTGATAGGGATAGCAAATACTATGGATCTTCCAGAGAAGTTACTTCCTCGTATATCAAGCCGAATGGGTATACAGAGGCTTTGCTTTAGCCCATATAATTATCAGCAGCTTCAAGAAATCATTTCGAGTCGCCTCAAGGGAAATGATGTATTTGAAAAGCAAGATATAGAATTTGCTTCAAGAAAGGTTGCAGCAATCTCAGGAGATGCATGTCGTGCTCTGGAGATATGCAGACTTGCAGCTGAAATAGCAGATTATCGTATGGAGGAGATAACTTCAAATACTGATATTGATGCTGCAGGAAAGGGACTTGTTGTTATGGCAGACGTTGAAGCAGCCATTCAAGAAATGTTCCAAGCACCTCATATTCAAGTTATGAAAAACTGTTCCAGACTTAGTAAAATTTTCCTGACGGCTATGGTGCACGAGCTTTATAAGACAGGAATGGGAGAAACCACTTTTGAAAAGTTGGCAATGACGGTTTCAGCTCTGTGTACCAGCAACGGAGAAGTTTTTCCTGGATATGATACCCTGCTGCAAGTTGGCTGTAAGCTAGGCGAATGCAGGGTTATTTTATGTGAAGCAGGTGCCAAGCACAGGTTGCAAAAATTGCAGCTTAAATTCCCGAGTGATGATGTAGCCTTTTCGCTGAGAGACTGCAAAGATCTACCTTGGTTGTCGAAGTATCTAATGTAG 1029 0.4111 MSVLSVMRSLRSEVDAGNIKPYCFVEINGLKLASPENIYKVIYEALNGHRVSWKKTLHLLNERFVEGKKTGEEADRPCILLIDELDLLVTRNQSVLYNILDWPTKPHSKLIVIGIANTMDLPEKLLPRISSRMGIQRLCFSPYNYQQLQEIISSRLKGNDVFEKQDIEFASRKVAAISGDACRALEICRLAAEIADYRMEEITSNTDIDAAGKGLVVMADVEAAIQEMFQAPHIQVMKNCSRLSKIFLTAMVHELYKTGMGETTFEKLAMTVSALCTSNGEVFPGYDTLLQVGCKLGECRVILCEAGAKHRLQKLQLKFPSDDVAFSLRDCKDLPWLSKYLM. 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g04934 342 Pfam AAA lid domain 164 196 IPR041083 -
Seca3g04934 342 Pfam ATPase family associated with various cellular activities (AAA) 22 135 IPR003959 GO:0005524|GO:0016887
Seca3g04934 342 Gene3D - 138 213 - -
Seca3g04934 342 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 1 336 - -
Seca3g04934 342 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 21 201 IPR027417 -
Seca3g04934 342 FunFam Origin recognition complex subunit 1 138 230 - -
Seca3g04934 342 Gene3D - 1 137 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g04934 Seca-Chr3 95487970 95491674 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g04934 1 341 Core DNA Replication Machinery Family AT4G14700 75.073 0.0 544
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g04934 K02603 - gmx:100814940 615.15