Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g04929 ATGTCATCATCAATGGCTTGTCATTCTCTCAACATTGATGTTGAAGAGATTCAAAGCCCCCAGTCCCACGTTTCTTCTGACTTTAACTCCACAAGTCCTCAGTCACCCACACCTCCGGAAAATGAATGGGTTCCAAATTGGGTTGAAGAATTGAAGCCCAAGGTTGGACAACAATTTGATACTTTAGAAGAAGGTGAAAATTTTTACAAAAGGTACGCACATAATGTTGGATTTAGTGTGCGTTGCTCATTGGAAACTAAAGATAAAAATGGTGTGAAGCATTGGAAGTATTTTGTTTGCTCAAAAGAAGGTTACAAACCAGATAAGGAAAAAGTTGGGGAACAAAGCAACTCAACTATTAAGTCTAGGAAAAGGAGTCTTACAAGAGAAAGATGCAATGCAAAGGCCATTTTCAAATTGGTAGGGGAAGGTAAATATGAGCTCATTCGATTTCATGAAAGTCATACACATGTACTCGCTTCACCTATGAAGAGACAGTTTCTAAGATCAGCAAGAAAGGAGTCACATTCGTGTTGCAGAAGCAAAAACCGGCTCAACGCAATTGCTACGTAA 573 0.3927 MSSSMACHSLNIDVEEIQSPQSHVSSDFNSTSPQSPTPPENEWVPNWVEELKPKVGQQFDTLEEGENFYKRYAHNVGFSVRCSLETKDKNGVKHWKYFVCSKEGYKPDKEKVGEQSNSTIKSRKRSLTRERCNAKAIFKLVGEGKYELIRFHESHTHVLASPMKRQFLRSARKESHSCCRSKNRLNAIAT. 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g04929 190 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 15 180 - -
Seca3g04929 190 MobiDBLite consensus disorder prediction 18 37 - -
Seca3g04929 190 Pfam FAR1 DNA-binding domain 67 159 IPR004330 -
Seca3g04929 190 MobiDBLite consensus disorder prediction 18 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g04929 Seca-Chr3 95424779 95427636 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Seca3g04929 FAR1 1.5e-16 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g04929 - - ccaj:114916444 276.944