Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g04927 ATGGTCACCAAAAACCAGAACCGGTCTCCATTATCACTCACACCCACATCTCCAACCCCTTCAAAGAACTTTGTGGGTGATGAGCTACTCCTAGTAGATAAAGGGCAACGAGTTGGAGCAGAAAAAATGGTGGGGACTCCGATTAATGGAAGAACAAGGCAAGCTTTTACAGTTGTAAATGGTGGCCATGATCTTGGCCCGAGTAGTGCTCCTCCAAGCAATGCTGGATCGGATTATGGTATAATAGAGTTCACAAGAGAGGATGTGGAAGCATTGCTAAATGAAAAGGCCAAAAGGAAGGACAGATTTAATTATAAGGAAAGATGTGAAAATATGATGGATTATATAAAAAGGCTTAAGGTTTGCATCAGATGGTTCCAAGACATTGAGATGAGTTACTCACTTGAGCAGGAAAAGTTAAAGAATTCACTGGAATTCACACAGCAAAAATGCATAGAAATTGAGTTGCTGCTTAAAATCAAGGAAGAAGAACTAAATTCAATTATTGCAGAAATGAGAAGGAATTGCACTTCTTTGCAAGAGAAATTGATTAAGGAAGAAACAGAAAAGACAGCTGCAGTGGAATCTCTTGTTAAAGAGAGAGAGGCTAGGCTTGACATTGAAAGGTCACAGAGTACTCTGTCAGAGGACCTTGGAAGAGCTCAACGAGAGATTCAAAGTGCAAATCAGAAGATATCATCACTCAATGAAATGTATAAGCGATTACAAGATTACATTACAAGCTTACAACAGTACAATGGAAAACTTCATACAGAGCTTTCATCAGTTGAAGATGAACTTAAACGTGTAGAGAAAGAGAAGGCTACTGTAGTGGAGAATATCACCATGTTAAGGGGTCAACTTACTTTAGCCATTAGTAGATTGTATTGTTTACAGTCTCATACTTTTGATTCTGAGGAGGGTTTACTTAAAACGAATCTTGTAAAGTCTTCTCAAGAAGAGGCCATAAAACAGAAGGATACTCTGGCTAGTGAAGTTGCTTCTCTTAGAGGAGAGTTGCATCAAGTAAGAGATGAACGAGACCGCCAATTATCTCAAGTGCAAACTTTAAATACTGAATTATTGAAATTTAAAGAAGCTACAGAAAACTCCAGCACTGAATTGGACAACTTGACATTGAAAGCAAGTGAACTAGAGGCAAAATGTTCTTTGAAAGATAATCAAATAAAGGCATTGCAAGAACAGCTAGCATCTGCAGAGAAGAAACTGCAGGCATCTGATATATCTGCATACGAGACAAGGACAGAATATCAAGGTCAACAAAAATTTGTGAATGAGTTACAAAGACGGTTAGCAGATGCAGAATATAAACTTATTGAAGGGGAGAGGCTGCGGAAAAAATTACATAATACCATTTTGGAGTTAAAAGGGAACATCCGTGTATTCTGTCGAGTGAGGCCTTTGTTGCCTGATGAAAGTTGTGGTACAGAAGGCAAGATTTTCAGTTATCCAACATCGATGGAAGCTTCTGGTCGAAGCATTGACCTAGCTCAAAATGGCCAAAAACATTCCTTTACATTTGATAAAGTTTTTACACCAGAGGCATCACAAGAAGAAGTTTTTGTAGAAATTTCACAACTTGTACAAAGCGCTCTTGATGGTTACAAGGTTTGCATCTTTGCCTATGGTCAGACAGGGTCAGGGAAAACCTATACAATGATGGGCAGGCCTGGACATCCAGAGGAGAAGGGCTTGATACCTCGTTCATTAGAACAAATATTTCAGACGAAGCAATCTCAGCAACCTCAAGGCTGGAAATATGAAATGCAGGTTTCAATGTTGGAAATCTACAATGAAACCATTCGTGATCTGATATCTACAGGATCACGCGTTGAAAATGGATCACCTGGAAAACAATATACAATTAAACATGATGCAAGTGGAAATACACAAGTTTCTGATCTTACAGTAGTAGATGTTCAAAGTGCTAAAGAGGTTGCATTTCTTTTAAATCAAGCTGCAAATAGCAGATCTGTGGGAAAAACCCAGATGAATGAACAATCATCAAGAAGTCATTTTGTATTCACTCTTCGAATATATGGAGTAAATGAGAGCACTGACCAACAAGTACAAGGAGTTCTGAATCTTATTGATCTTGCTGGTAGTGAGCGCCTTTCGAAGAGTGGATCAACAGGGGACCGGTTGAAAGAAACTCAAGCAATCAACAAAAGTCTATCATCATTGAGTGATGTCATATTTGCCTTAGCCAAGAAGGAGGATCATGTGCCATTCAGGAACTCAAAGCTTACATATCTACTTCAACCTTGTCTGGGTGGGGACTCCAAGACACTGATGTTTGTAAACATCTCACCTGATCCTTCTTCAGTTAATGAATCACTATGCTCACTAAGGTTTGCATCCAGAGTCAATGCTTGTGAAATTGGAACACCTCGTCGTCAGACCAATGGACGATCTACAGATTCTCGATTGAACTATTTCTGA 2463 0.3914 MVTKNQNRSPLSLTPTSPTPSKNFVGDELLLVDKGQRVGAEKMVGTPINGRTRQAFTVVNGGHDLGPSSAPPSNAGSDYGIIEFTREDVEALLNEKAKRKDRFNYKERCENMMDYIKRLKVCIRWFQDIEMSYSLEQEKLKNSLEFTQQKCIEIELLLKIKEEELNSIIAEMRRNCTSLQEKLIKEETEKTAAVESLVKEREARLDIERSQSTLSEDLGRAQREIQSANQKISSLNEMYKRLQDYITSLQQYNGKLHTELSSVEDELKRVEKEKATVVENITMLRGQLTLAISRLYCLQSHTFDSEEGLLKTNLVKSSQEEAIKQKDTLASEVASLRGELHQVRDERDRQLSQVQTLNTELLKFKEATENSSTELDNLTLKASELEAKCSLKDNQIKALQEQLASAEKKLQASDISAYETRTEYQGQQKFVNELQRRLADAEYKLIEGERLRKKLHNTILELKGNIRVFCRVRPLLPDESCGTEGKIFSYPTSMEASGRSIDLAQNGQKHSFTFDKVFTPEASQEEVFVEISQLVQSALDGYKVCIFAYGQTGSGKTYTMMGRPGHPEEKGLIPRSLEQIFQTKQSQQPQGWKYEMQVSMLEIYNETIRDLISTGSRVENGSPGKQYTIKHDASGNTQVSDLTVVDVQSAKEVAFLLNQAANSRSVGKTQMNEQSSRSHFVFTLRIYGVNESTDQQVQGVLNLIDLAGSERLSKSGSTGDRLKETQAINKSLSSLSDVIFALAKKEDHVPFRNSKLTYLLQPCLGGDSKTLMFVNISPDPSSVNESLCSLRFASRVNACEIGTPRRQTNGRSTDSRLNYF. 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g04927 820 Coils Coil 368 416 - -
Seca3g04927 820 Coils Coil 253 280 - -
Seca3g04927 820 CDD KISc_C_terminal 463 801 - -
Seca3g04927 820 SMART kinesin_4 463 807 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca3g04927 820 ProSiteProfiles Kinesin motor domain profile. 465 799 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca3g04927 820 Coils Coil 431 451 - -
Seca3g04927 820 Coils Coil 326 360 - -
Seca3g04927 820 Coils Coil 162 189 - -
Seca3g04927 820 PRINTS Kinesin heavy chain signature 541 562 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca3g04927 820 PRINTS Kinesin heavy chain signature 669 686 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca3g04927 820 PRINTS Kinesin heavy chain signature 700 718 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca3g04927 820 PRINTS Kinesin heavy chain signature 749 770 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca3g04927 820 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 423 797 IPR027417 -
Seca3g04927 820 MobiDBLite consensus disorder prediction 1 24 - -
Seca3g04927 820 PANTHER KINESIN-LIKE PROTEIN KLP-3 297 807 IPR027640 GO:0003777|GO:0007018
Seca3g04927 820 Coils Coil 211 245 - -
Seca3g04927 820 Pfam Kinesin motor domain 471 797 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Seca3g04927 820 Gene3D Kinesin motor domain 407 801 IPR036961 -
Seca3g04927 820 Coils Coil 82 102 - -
Seca3g04927 820 MobiDBLite consensus disorder prediction 1 23 - -
Seca3g04927 820 ProSitePatterns Kinesin motor domain signature. 699 710 IPR019821 GO:0003777|GO:0005524|GO:0007018
Seca3g04927 820 FunFam Kinesin-like protein 411 801 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g04927 Seca-Chr3 95391985 95397651 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g04927 378 811 Calmodulin-binding Proteins AT5G65930 36.142 1.56e-78 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g04927 K10405 - gmx:100784221 1386.32