Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g04876 ATGCCAGCAATCGCCGCCAAGCGCAGATTAAGATCTCACTCCCCGCCCACCCCCAAATCGCCCTGCCGATGCACCGCCGCAACCGCCTATTCCTCTGAAAGTAAAATCGGCGCTGATGGAAACAAAGCACAATCGCTTGAACCCACAGCTGTGAAGCCTCACTGGAATCCCAAAGATGGTGAGCAATTGAGGAGGGTGAAGGAGGCATTGCACTTGTCCACTGCACCGTCTACTGTCGTTTGCCGTGAGGAGGAGCAGAATGTGGTTTTGGGGTTTTGTAAAAGGTGCATTGAGCACGAGAAAGCTGGGAGTCTCTACATATGTGGGTGTCCTGGAACCGGGAAATCATTATCTATGGAGAAAGTGAAAGAGCTTTTGCTCAACTGGGCTACTGAGGCAGGTTTCCCATTGCCAGATGTTGTATCTGTAAATTGTACATCCCTGGCCAGTACATCTGATATTTTCACTAAGATACTTGGGTTAAACAAAGCACTAGGAAAAAAGGTTTCAGGCACACCCTTACAGCAACTTCAGAACATATACTCTCAGAAATTGTCTGTCAAGAACATGATATTGATTGTAGCTGATGAATTAGATTATCTAATAACCAAAGACAGAGGTGTCCTCCATGATCTTTTCATGCTTACCACTCTCCCATTTTCCAGATGTATATTAATAGGTGTAGCTAATGCAATTGACCTAGCTGATCGAATTCTTCCAAGGCTTACGTCATTGAATTGCAAGCCTATTGTTGTAAACTTTCAGGCATACTCTAAAGATCAAATCCTTAGGATTCTTGAAGAAAGGCTAAAAGGACTTCCTTACACTGTCTTCCAACATCAAGCGCTGGAACTATGTGCCAGGAAAGTTGCTGCAGCTTCTGGAGACATGCGAAATGCTCTTTGTATATGCAGGTCAGTCATTTTGTCATTATTGTTATTATTAATTATTATTAGTAACTGTATTGGCTATTATGCGCATGATAAATCAATGCATCTGCATTTTGTTTACCATATTTTAAATGCAGTCCATTGA 1035 0.428 MPAIAAKRRLRSHSPPTPKSPCRCTAATAYSSESKIGADGNKAQSLEPTAVKPHWNPKDGEQLRRVKEALHLSTAPSTVVCREEEQNVVLGFCKRCIEHEKAGSLYICGCPGTGKSLSMEKVKELLLNWATEAGFPLPDVVSVNCTSLASTSDIFTKILGLNKALGKKVSGTPLQQLQNIYSQKLSVKNMILIVADELDYLITKDRGVLHDLFMLTTLPFSRCILIGVANAIDLADRILPRLTSLNCKPIVVNFQAYSKDQILRILEERLKGLPYTVFQHQALELCARKVAAASGDMRNALCICRSVILSLLLLLIIISNCIGYYAHDKSMHLHFVYHILNAVH. 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g04876 344 Gene3D - 248 310 - -
Seca3g04876 344 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 69 309 IPR027417 -
Seca3g04876 344 Pfam AAA domain 100 215 IPR003593 GO:0016887
Seca3g04876 344 CDD AAA 97 242 - -
Seca3g04876 344 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 25 308 - -
Seca3g04876 344 Gene3D - 60 247 IPR027417 -
Seca3g04876 344 FunFam Cell division control protein 60 245 - -
Seca3g04876 344 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g04876 Seca-Chr3 94538002 94548237 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g04876 14 308 Core DNA Replication Machinery Family AT2G29680 63.607 1.81e-132 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g04876 K02213 - gmx:100791200 477.633