Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g04873 ATGGATGGCGTAGGACTTAATCGAAGGGGAATTCAAGGAATTGAAGGCGAAAACCATGGTTTTAATGGAAATGAGGATGAACAGATGATGGGCAATTCTGAAAAGGGAGACAGTTCCTCTAATGCATCATTGAGGGCTAGAAAGATGCAAGGAAACACCCTATTGAGGATTGGTGATGCTGAAGTGAATTTTGAGCATTTCGAGACCATGGATGGTGCAGGACTTAATAGAAGGGGAATTCAAGGAATTGAAGGCGAAAACCATGGTTTTAATGGAAATGAATATGGACAGCTGATGGGCAATTCTGAAAAGGGAGGCAGTTCTTCTAATGCATCTTTGAGGGCTAGAAAGATGCAAGGAAACACCCTTTTGAGGATTGGTGATGCAGAAGTGAATTTTGAGCATATCGAGACCATGGATGGTGCAGGACTTAATGGAAGGGGAATTCAAAGAATTCAAGGCGAAAACCATGGTTTTAATGGAAATGAATATGGACAGCTGATGGGCAATTCTGAAAAGGGAGGTAGTTCTTCTAATGCATTTTTGAGGGCTAGAAAGATGCAAGGAAACACCCTATTGAGGATTGGTGATGCAGAAGTGAATTATGAGCATTCTGAGGCCATGGATGGTGTAGGACTTAGAAGGGGAACTCAAGGAACTGAAGATGAAAATCATAGTTTTAACAAATATGAGGATGGACAGATGATGGGCAACTTTGAAGATGGAGGCAGTTCTTCTAATGCACCTTCGAGGGCTAAAAAGATGCAGGGCAATACCCAATTGAGGATTGGTAATGCAGAAGTAAATTCTGAGACTATGGCATTATCTCCAGAAAATCTTTCAAATTATACACTTCCAGGGACTACTTATGTGCACCCAAAGTTCTACATTGAACGAGAAAGTGACATTTTCATCATAACCTCAATAAATGTCGAGCCGGCTAAATCAAAAATTTGTGAACTTGCACAATCATCTATGGAGGAATTGTCAAAGATAGTCGTTCTTGGAAAACCTTTATGGCAACCCCAAAAAGGCCAAAAGTTTGAGATAATGGACAAAATTGAATATTTGAAACATTATTGTCCAACCGATGAAATGCTAAAGGGGATTATTAAAATGGCTGAGAATGAATGGTCGAGATCATTTTATACTATTGTGGCAAGATCAACTGTCCTTGGAGTCTTTCTAAGTGGATTGGAAGGAGGCAATGATGGGAAATTGCAAGTGATAAATGCAGAATTTCAATTGCCTTCACCATTTGCATCGACTTGGGAGTGTAATTTCGCAAGGTACTGTAAGAAGTTGGCTCATAATAAGTGGGTGGTGGTGGATTTTTCGTTGGAGAAGATTTTTCCTTCTCTAGCAAACAAATTTCGCAGAAGACCATCAGGTTGTTTGATTAAGAAAGTGGCGGATGGATACTCTAAGGTTATATGGGTTGAGCATTTGGTAGCAGACTATAGTGAATATAACGATCAGTTCCGGTCATTAGTCTCCTCAGGTTTGGCCTTTGGTGCACCGCGTTGGCTTGCTTGTTTAGTTCGTTCAATTGAATGCTTTGAAACACTAAAAGCAAATCCTGTTCCCACATACTATGGAACTTGGATCACTCAAATGGGGCAAACAGGTCTCTTAAATTTAGCTGGAAGAATGATGAGAATCTTTTGTGCTGGTATTAGTGCTTCCTCAATAAACCCATCTTGGACACAAGTTGCTTCACTTGCTAGTTCTCAAGATTTGATGATCAGGGTTAATAGTATTGTACAAGATTTTGGAAGGACAAAAGGTACTGCAGTGATCTTCTCTACTTCTGTTTCGCTTCCAACCTCGCCTAGGCGATTATTTGATCACCTTCGTGATATGAACTCTAGAAAGTGGAATGATGTTCAAGAACTCGTCTATGTTATTCAAGGCAATGATCCTAGGAATCGCGTCTCCATCATTCAAGCAGATCCTGGTTTGGGCATGGCAGGTACACTTTTTGTACAAGAAAGTTACATGGACTCAGCAGGCTCCTCCTTTGTGGTTTATTCTCATGTGGATAAGTTAGTTTTGTCAAATGTTCTAAATGGAGCAAACCCAGAGTTAGTGACCATGATGCCTTCAGGGTTTGCTATCCTTCCTGATGGGATGCCATCAAGTGATGATGATGTTGGTGGTGGTGGCTCTGGAAGTATTCTAACTATTGCATACTACATGGTTGTAACTCTTACCGGTAATCCACTCTTCATCCCTGATAACACAATGGATGTTTTCAAGCAACTTATTGCTAACACTGTCACTGATATAGAGAATGCAGTTCTCCATAATAATGCCTGA 2319 0.4049 MDGVGLNRRGIQGIEGENHGFNGNEDEQMMGNSEKGDSSSNASLRARKMQGNTLLRIGDAEVNFEHFETMDGAGLNRRGIQGIEGENHGFNGNEYGQLMGNSEKGGSSSNASLRARKMQGNTLLRIGDAEVNFEHIETMDGAGLNGRGIQRIQGENHGFNGNEYGQLMGNSEKGGSSSNAFLRARKMQGNTLLRIGDAEVNYEHSEAMDGVGLRRGTQGTEDENHSFNKYEDGQMMGNFEDGGSSSNAPSRAKKMQGNTQLRIGNAEVNSETMALSPENLSNYTLPGTTYVHPKFYIERESDIFIITSINVEPAKSKICELAQSSMEELSKIVVLGKPLWQPQKGQKFEIMDKIEYLKHYCPTDEMLKGIIKMAENEWSRSFYTIVARSTVLGVFLSGLEGGNDGKLQVINAEFQLPSPFASTWECNFARYCKKLAHNKWVVVDFSLEKIFPSLANKFRRRPSGCLIKKVADGYSKVIWVEHLVADYSEYNDQFRSLVSSGLAFGAPRWLACLVRSIECFETLKANPVPTYYGTWITQMGQTGLLNLAGRMMRIFCAGISASSINPSWTQVASLASSQDLMIRVNSIVQDFGRTKGTAVIFSTSVSLPTSPRRLFDHLRDMNSRKWNDVQELVYVIQGNDPRNRVSIIQADPGLGMAGTLFVQESYMDSAGSSFVVYSHVDKLVLSNVLNGANPELVTMMPSGFAILPDGMPSSDDDVGGGGSGSILTIAYYMVVTLTGNPLFIPDNTMDVFKQLIANTVTDIENAVLHNNA. 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g04873 772 MobiDBLite consensus disorder prediction 1 42 - -
Seca3g04873 772 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 254 767 IPR042160 -
Seca3g04873 772 MobiDBLite consensus disorder prediction 85 111 - -
Seca3g04873 772 MobiDBLite consensus disorder prediction 94 111 - -
Seca3g04873 772 ProSiteProfiles START domain profile. 311 522 IPR002913 GO:0008289
Seca3g04873 772 MobiDBLite consensus disorder prediction 154 176 - -
Seca3g04873 772 SUPERFAMILY Bet v1-like 314 519 - -
Seca3g04873 772 SUPERFAMILY Bet v1-like 538 763 - -
Seca3g04873 772 Pfam START domain 376 516 IPR002913 GO:0008289
Seca3g04873 772 SMART START_1 320 519 IPR002913 GO:0008289
Seca3g04873 772 MobiDBLite consensus disorder prediction 25 42 - -
Seca3g04873 772 MobiDBLite consensus disorder prediction 155 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g04873 Seca-Chr3 94499575 94514979 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g04873 302 735 Homeobox Transcription Factor Family AT4G04890 37.500 1.12e-87 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g04873 K09338 - aew:130782366 299.671