Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g04870 ATGAAGCGTGTCCCTCTGCTTCTAAACAGGCTTACAGGCCAGGCTAGGCTTTTTCGCAGGCCAGGCCAAGGCCTTACAAAAAAACCCTGTAACAGCATCTTTGTAATCGATTACTTGCAAGCAATCACTCTGGTAATCGATTACAGCCTCTTTGTAATCGATTACCTGCGAGCAGACACCCTGGTTATATGGGTTGAGCATTTAGTAGCAGACTATAGTGAATATAACGATCAGTTCCGGTCGTTAGTCTCCTCAGGTTTGGCCTTTGGTGCACCGCGTTGGCTTGCTTGTTTAGTTCGTACCATTGAATGCTTTGAAACACTAAAAGCAAATCTTGTTCCAACATACTATGGAAGTCTCTTAAATTTAGCTGGAAGAATGATGAGAATCTTTTGTACTGATATTAGTGCTTCCTCAATAAACCCATCTTGGACACAAGTTGCTTCATTTGATAGTTCTCAAGATTTGATGATCAGGGTTAATAGTATTGTACAAGATTTTGGAAGGACAAAAGGTACCGCAGTGATCTTCTCTACTTCTGTTTCGCTTCCAACCTCGCCTAGGCGATTATTTGATCACCTTCGTGATGTGAACTCTAGAAAGTGGAATGATGTTCAAGAACTCGTCTATGTTATTCAAGGCAATGATCCTAGGAATCGCGTCTCCATCATTCAAGCAGATCCTGGTTTAAGCATGGCAGGTACACTTTTTGTACAAGAAAGTTACATGGACTCAGCAGGCTCCTCCTTTGTGGTTTATTCTCATGTGGATAAGTTAGTTTTGTCAAATGTTCTAAATGGAGCAAACCCAGACTTAGTGACCATGATGCCTTCAGGGTTTGCTATCCTTCCTGATGGGATGCCATCAAGTGATGATGATGTTGGTGGTGGTGGCTCTGGAAGTATTCTAACTATTGCATACTACATGGTTCTAACTCTTACCGGTAATCCACTCTTCATCCCTGATAACACAACGAATGTTTTCAAGCAACTTATTGCTAACACTGTCACTGATATAGAGAATGTAGTTCTCCATAATAATGCCTAA 1047 0.4145 MKRVPLLLNRLTGQARLFRRPGQGLTKKPCNSIFVIDYLQAITLVIDYSLFVIDYLRADTLVIWVEHLVADYSEYNDQFRSLVSSGLAFGAPRWLACLVRTIECFETLKANLVPTYYGSLLNLAGRMMRIFCTDISASSINPSWTQVASFDSSQDLMIRVNSIVQDFGRTKGTAVIFSTSVSLPTSPRRLFDHLRDVNSRKWNDVQELVYVIQGNDPRNRVSIIQADPGLSMAGTLFVQESYMDSAGSSFVVYSHVDKLVLSNVLNGANPDLVTMMPSGFAILPDGMPSSDDDVGGGGSGSILTIAYYMVLTLTGNPLFIPDNTTNVFKQLIANTVTDIENVVLHNNA. 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g04870 348 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 61 342 IPR042160 -
Seca3g04870 348 SUPERFAMILY Bet v1-like 117 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g04870 Seca-Chr3 94388658 94396292 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g04870 62 311 Homeobox Transcription Factor Family AT4G04890 36.101 2.20e-45 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g04870 K09338 - cit:102619682 180.259