Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g04845 ATGGAGGAGATGCGAGAAGATGCAGGACCGGCAGAGCAAAGGCCATCCAATGTGTCATGGTGGCCTTCAGATTTCGTTGAAAAATTTGGATCTGTTTCTTTGGGCTCTCAAGATGAGACCTTAAATAATAAAGAATCACCTAGACACACTAACCAAGATTTTATGTCACCTCAGAGAGCATCACAAATTCTCTGGTGCACTGGAATGCTTTCAGAACCAATACCGAATGGTTTTTATTCAGTTGTTCCGGAGAAAAGGCTCAGGAAGCTTTTCGATAGTATTCCCACTTTGGACGAGCTTCATGCTTTGGGTGGAGAAGGTTTTAGGGCTGATATAATTGTTGTGGATGCAGAGAAAGATAGAAAGTTATCTATGTTGAAGCAATTAATTGTGGCATTGGTTAAAGGATTGAACTCAAATCCAGCTGCGATGATTAAGAAGATAGCTGGATTGGTTTCTGATTTTTATAAGCGGCCAAATGTAGAAAGTCCAGCAAAAGCTGTACTTGAGGAATCCTCCCACATGTTTGAGAATCGTGGTGTCCAGATGCTGGGGCAAATAAAGCATGGTTCATGTCGTCCTCGAGCTATCTTATTTAAAGTATTGGCAGATACTGTAGGTCTTGAAAGTAGGCTTATGATGGGTTTTCCAAATGATGGGGCTGCTGAGTGTGTAGACTCATACAAGCATATGTCTGTGATAGTTGTGTTAAATTCTGTGGAATTGCTGGTTGATCTTATGCGTTTTCCTGGCCAACTGTTACCACGATCAATCAAATCAATTCTTATGACACACATTTCTGCAGCTGGAGAGAGTGATTCGGCAGAAAATGATTCTTGTGATTCACCATTAGAGCCAAACAGTCCTTTATATGGGGTTTCAGAGAGTGTTGATAAGGAGGAAATCCTCCAATTCCATAGAAGATTTGAAGCATCTTCAAATGTATCAGGCCTTCCCTTACGAAATATGATGTTACGATCAAATCCCAGTTTGGATGGGAAAATGAGTTTGTCTCATAGTGAACCCAACATTGCAACTGCATTTGGTCGGCGTAGTCGGAGAAAGGTCATTGCTGAACAGAGGACTGCTAGTTCAAGTCCAGAACATCCATCATTTCGAGCGCGTGGACGGTCCAAACTTAGTGGTGACAGGACTGCATTTAGAGATTTTGCTGATGACCAGGCTACATCAAGATCCAGCTATAAGTCAGATGGTGCATCATCATCAGAAGCTCGTAGGCTACGAAGAAGAAGCATCAGCATTACACCAGAGATTGGTGATGATATCGCTAGGGCTGTACGGGCAATGAATGAAAAGCTAAAGCAAAATCGTCTTCTGAGAGAACAAGGGGATGATAGTTCATTGCCCCATTCTCCAAATGATACAACTAGCAGTGCAGATCTTCAAAAAAATGTGGTTTTAGCATGTGTGGAGAAGACCCACAGAAGAGCAAGTAAGGAAGGAGGGTAG 1470 0.4231 MEEMREDAGPAEQRPSNVSWWPSDFVEKFGSVSLGSQDETLNNKESPRHTNQDFMSPQRASQILWCTGMLSEPIPNGFYSVVPEKRLRKLFDSIPTLDELHALGGEGFRADIIVVDAEKDRKLSMLKQLIVALVKGLNSNPAAMIKKIAGLVSDFYKRPNVESPAKAVLEESSHMFENRGVQMLGQIKHGSCRPRAILFKVLADTVGLESRLMMGFPNDGAAECVDSYKHMSVIVVLNSVELLVDLMRFPGQLLPRSIKSILMTHISAAGESDSAENDSCDSPLEPNSPLYGVSESVDKEEILQFHRRFEASSNVSGLPLRNMMLRSNPSLDGKMSLSHSEPNIATAFGRRSRRKVIAEQRTASSSPEHPSFRARGRSKLSGDRTAFRDFADDQATSRSSYKSDGASSSEARRLRRRSISITPEIGDDIARAVRAMNEKLKQNRLLREQGDDSSLPHSPNDTTSSADLQKNVVLACVEKTHRRASKEGG. 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g04845 489 MobiDBLite consensus disorder prediction 453 469 - -
Seca3g04845 489 MobiDBLite consensus disorder prediction 33 54 - -
Seca3g04845 489 MobiDBLite consensus disorder prediction 446 469 - -
Seca3g04845 489 Coils Coil 429 449 - -
Seca3g04845 489 Pfam Ethylene-responsive protein kinase Le-CTR1 58 253 - -
Seca3g04845 489 MobiDBLite consensus disorder prediction 392 407 - -
Seca3g04845 489 MobiDBLite consensus disorder prediction 358 415 - -
Seca3g04845 489 MobiDBLite consensus disorder prediction 372 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g04845 Seca-Chr3 93983344 93999292 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g04845 1 472 MAP Kinase Kinase Kinase AT3G58640 66.457 0.0 630
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g04845 - - gmx:100807193 830.091