Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g04839 ATGGACTCCGACACCGGAGCTCCGTCGCCTGCCGCCCTCGCTCCGCCGCGTCCTCCGTCGTCGTCGTCGCCGTTCCCTGGTCGGGAAGACTGCTGGAGCGAGGACGCCACCTTCACCCTCATCGACGCCTGGGGCGACCGCTACCTCGACCTCAACCGCGGCAACCTCCGTCAGAAGCACTGGCAGGAGGTCGCCGACGCCGTCAACGACCGCCACGCCGCCGTCGCCGCCGGCAACAAGAAAGCGCGCCGAACCGACGTCCAGTGCAAGAACCGAATCGACACGCTCAAGAAGAAGTACAAGATCGAGAAGGCTAGGGTTTCCGAATCCGACGGTACTTACCTGAGCCCCTGGCCCTTCTTTTCCCGCCTCGACGCCCTCATCGGCGACACTTTTCCGGTCAAAAAACTCTCGCCGCCGGCCACCGCTGCCAAGCCGCCTCCGCCGGCATGGATTACCTCACACCCTGTCGGTCCCCGATCCGGGACTCAGAAACGTCCGGCGACGGCGTTGTCGGCGCCGAGCAGGGACGACTCGTTGTTCCGCCGGAATTTCTCTGCTTTCGCGGCGGCGGCGGCTGCCGCCGCAGAGGCTGAAAGCGGCGAGTCGGAGGAATGGAGGTCGAGCAGTGGCACGGGGAGTGGGAAGAGGGGAAGAGAAAGTGATAACAAAGATTTGGAATTTGGGTGTAGAGAGCTTGCTCAGGCCATAGAGAGGTTTGGAGAGATATATGAGAGAGTGGAGGCACAGAAACAGAGGCAAATGGTGGAGTTGGAGAAGCAGAGGATGCAGTTTGCAAAAGATTTGGAGTACCAGAGGATGCAACTCTTCATGGAAACTCAAGTTCAGCTGCAGAAAATCAAAAGCACCAAGCGATCTTCAGGAGCTGGTCGGAGTTGCAGTTTTCGTTGA 912 0.602 MDSDTGAPSPAALAPPRPPSSSSPFPGREDCWSEDATFTLIDAWGDRYLDLNRGNLRQKHWQEVADAVNDRHAAVAAGNKKARRTDVQCKNRIDTLKKKYKIEKARVSESDGTYLSPWPFFSRLDALIGDTFPVKKLSPPATAAKPPPPAWITSHPVGPRSGTQKRPATALSAPSRDDSLFRRNFSAFAAAAAAAAEAESGESEEWRSSSGTGSGKRGRESDNKDLEFGCRELAQAIERFGEIYERVEAQKQRQMVELEKQRMQFAKDLEYQRMQLFMETQVQLQKIKSTKRSSGAGRSCSFR. 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g04839 303 MobiDBLite consensus disorder prediction 140 154 - -
Seca3g04839 303 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 17 291 IPR044823 -
Seca3g04839 303 MobiDBLite consensus disorder prediction 199 223 - -
Seca3g04839 303 FunFam trihelix transcription factor ASIL2 32 102 - -
Seca3g04839 303 Coils Coil 244 264 - -
Seca3g04839 303 MobiDBLite consensus disorder prediction 138 175 - -
Seca3g04839 303 Pfam Myb/SANT-like DNA-binding domain 29 127 IPR044822 -
Seca3g04839 303 Gene3D - 32 102 - -
Seca3g04839 303 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g04839 Seca-Chr3 93823455 93827494 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g04839 182 288 Trihelix Transcription Factor Family AT3G14180 37.815 2.84e-15 73.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Seca3g04839 Myb_DNA-bind_4 7.7e-26 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g04839 - - lang:109355153 382.489