Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g04823 ATGGTGGATGCAATGAAGAAACTTGCAAATCTTGATGTCGAACTGACCATTGAAGAGCGAAATTTACTTTCTGTTGGTTATAAGAATGTGGTTGGTGCTCGCAGAGCATCATGGAGAATCTTGTCTTCCATAGAGCAAAAGGAAGAAACAAAAGGAAATGAAGTAAATGTAAAACGGATTAGGGAATATAGGAAGAAGGTTGAATTGGAGCTTTCAAACATCTGTAATGATGTTATGAGAGTGATTGATGAACATCTGATACCTTCAGCTGCAGCTGGTGAATCAACCGTGTTTTATTATAAGATGAAAGGAGATTACTATAGATATCTTGCAGAATTTAAGCCAGGGAATGAGAAGAAGGAGGCTGCTGATCAGTCAATGAAAGCATATGAGTCTGCTACAACGACAGCAGAGGCCGAATTACCTCCCACTCATCCCATCCGATTGGGTCTGGCTTTAAATTTCTCCGTTTTCTATTATGAGATCATGAATTCACCAGAGAGGGCCTGTCATTTTGCAAAGCAAGCTTTTGATGAAGCTATTTCTGAGCTTGACACCTTGAGTGAAGAGTCATACAAAGATAGCACCTTGATCATGCAGCTTCTCAGGGACAACCTTACATTGTGGACTTCTGACATCCCAGAAGATGGAGAGGATTCCCTGAAAGTGAATGGCAGCGCCAAGGTTGGCGGACATGAGGATGTAGAGGTCAGTAATTCTTTAATAAACGTTGCTATATCATTAAAATTTCTATTTGACTGCTTTAATTTATTCAACTCTACTTTTTGTTAG 792 0.3977 MVDAMKKLANLDVELTIEERNLLSVGYKNVVGARRASWRILSSIEQKEETKGNEVNVKRIREYRKKVELELSNICNDVMRVIDEHLIPSAAAGESTVFYYKMKGDYYRYLAEFKPGNEKKEAADQSMKAYESATTTAEAELPPTHPIRLGLALNFSVFYYEIMNSPERACHFAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGEDSLKVNGSAKVGGHEDVEVSNSLINVAISLKFLFDCFNLFNSTFC. 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g04823 263 Pfam 14-3-3 protein 1 210 IPR023410 -
Seca3g04823 263 SMART 1433_4 1 223 IPR023410 -
Seca3g04823 263 FunFam 14-3-3 gamma 1 1 220 - -
Seca3g04823 263 SUPERFAMILY 14-3-3 protein 2 219 IPR036815 -
Seca3g04823 263 PIRSF 14-3-3 1 222 IPR000308 -
Seca3g04823 263 ProSitePatterns 14-3-3 proteins signature 1. 20 30 IPR023409 -
Seca3g04823 263 Gene3D - 1 224 IPR036815 -
Seca3g04823 263 PRINTS 14-3-3 protein zeta signature 129 155 IPR000308 -
Seca3g04823 263 PRINTS 14-3-3 protein zeta signature 156 182 IPR000308 -
Seca3g04823 263 PRINTS 14-3-3 protein zeta signature 63 87 IPR000308 -
Seca3g04823 263 PRINTS 14-3-3 protein zeta signature 14 43 IPR000308 -
Seca3g04823 263 PRINTS 14-3-3 protein zeta signature 94 116 IPR000308 -
Seca3g04823 263 PRINTS 14-3-3 protein zeta signature 183 212 IPR000308 -
Seca3g04823 263 ProSitePatterns 14-3-3 proteins signature 2. 192 211 IPR023409 -
Seca3g04823 263 PANTHER 14-3-3 PROTEIN 1 213 IPR000308 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g04823 Seca-Chr3 93574369 93576946 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g04823 1 238 14-3-3 family AT2G42590 80.833 4.38e-143 400
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g04823 K06630 - gmx:547990 430.639