Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g04781 ATGGAGTCGCATTGCTTCCTATGTTTACACGCCGCATATTTTCTCCTCCTCGCTTCAACCGTATGCTGCCTTTCACACCCTTCTCTCCTTGGCGTCCACCCTCTAGATGAGAAATATTACAGCTCTGAGGTGATCAAGTGCAGGGATGGATCAAAATCCTTCTCCAGAGATCGTCTCAATGACAATTTCTGTGACTGCTCTGATGGCACTGATGAACCTGGAACTTCAGCTTGCCCAGCAGCAAAGTTTTATTGCAGAAACCTAGGAAGCAAGCCACTGTTTATAGTCTCTTCTCATGTCAATGATAATTTTTGTGATTGTTGTGATGGGAGTGATGAATATGATGGAAACATTCATTGCCCCAACACATGCGTCATGGGTGGCAATACTGAGTACATGATTGGCAATTACAATACAAAAGTAAGTGATTTTCCTGAAAAAGAAAGCAAAAATGGAGTGAAGTCAGAGGAATCAGTTCGTAATCTTACTGGTTTGAAATTGGCAATTATTCTACAAGTGGTTCTGGTTATTTTTGTGGTATTTCTCTGGAGTTTTCGTTGCCACACCAGATCTAGAAGGAGGCGTTACCGTTGA 594 0.4226 MESHCFLCLHAAYFLLLASTVCCLSHPSLLGVHPLDEKYYSSEVIKCRDGSKSFSRDRLNDNFCDCSDGTDEPGTSACPAAKFYCRNLGSKPLFIVSSHVNDNFCDCCDGSDEYDGNIHCPNTCVMGGNTEYMIGNYNTKVSDFPEKESKNGVKSEESVRNLTGLKLAIILQVVLVIFVVFLWSFRCHTRSRRRRYR. 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g04781 197 Pfam Glucosidase II beta subunit-like 21 126 IPR028146 -
Seca3g04781 197 PANTHER N-LINKED OLIGOSACCHARIDE PROCESSING 14 158 IPR039794 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g04781 Seca-Chr3 92964882 92966632 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g04781 29 138 Calmodulin-binding Proteins AT5G56360 62.069 1.58e-45 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g04781 - - tpra:123907740 293.123