Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g04753 ATGGGACCCCATGGTGAAGACAATGCTGACAAACTACTTGGATCTCAAAACTACTTATTCAATCACATGATCTCTATGTCCCTTAAATGTGCAATTGACTTGAGCATTCCTGATATCATACACAAATATGGCCAACCCATGCCACTCCCACAACTCATGGCTTCACTACCAATCCACCCCTCCAAAACTCAGGGCATAATTCCCATGATGCGAACTTTGACCCATTCTGGTTTCTTTATCACTCTGCAAAATGAGCAAGAAGTGAGGTATGCACTAACTGATGCTTCTAGACTGTTGTTTAAGGACCATCCCTTGAAAATGGTATCTTTCTTGCTTGCCGCAATTGATCCAGTCTTTTTGAAGCCATGGTATCAAATTTGTAATCGGTTCAAAACCCAAGATATTCCTACACCATTTCGCACAGAAAATGGGTTGGCATTTTGGGATTATGCTGCCCATGATCCCAAAGTCAATCGCTTATTCAATAATGCCATTGCTAGTGTGACTCAATTAACTTTAAGTGTGGTGGAGGAAAAGTACAAGGAGGTGTACAAGGGATTGGAGTCCTTGGTTGATGTTGGGGGAGGCACAGGCAATCTGGCTAAGGCCATTGCAGAGTTATTCCCACAATTGGAATGCATTGTATTTGATCTTCCACATGTTGTTGCTGGCTTGCAAGGAAGTGGAAACTTAAAATATGTTGGAGGGGACATGTTTGAGGCAATTCCTCCTGCTGATTCCATTTTGCTCAAGAATGTATTGCATGAGTGGAGTGACGAGGAATGCCTGAAAATACTGAAGAAATGCAAGGAGGCAATCTCGAGAAAAGATAAAGAGGGGAAGGTGATCATTATAGATGTGGTGATGGGGATTGAGAAGGCAGGTAGTGAATTAGTTGAAACAAAGCTCTTCTATGCTTTGCTGAAGATGAGGACAGTCACCGGAAAAGAGAGGAATGAGAAAGAATGGGCCAACCTGATTTTGTCTGCTGGTTTTAGCCGCTATAAAATACATCCTCTTCTGGGTTTTAGGTATGTCATTGAGGTTTATCCATAG 1056 0.4223 MGPHGEDNADKLLGSQNYLFNHMISMSLKCAIDLSIPDIIHKYGQPMPLPQLMASLPIHPSKTQGIIPMMRTLTHSGFFITLQNEQEVRYALTDASRLLFKDHPLKMVSFLLAAIDPVFLKPWYQICNRFKTQDIPTPFRTENGLAFWDYAAHDPKVNRLFNNAIASVTQLTLSVVEEKYKEVYKGLESLVDVGGGTGNLAKAIAELFPQLECIVFDLPHVVAGLQGSGNLKYVGGDMFEAIPPADSILLKNVLHEWSDEECLKILKKCKEAISRKDKEGKVIIIDVVMGIEKAGSELVETKLFYALLKMRTVTGKERNEKEWANLILSAGFSRYKIHPLLGFRYVIEVYP. 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g04753 351 PANTHER O-METHYLTRANSFERASE 22 336 IPR016461 GO:0008168
Seca3g04753 351 Pfam Dimerisation domain 26 74 IPR012967 GO:0046983
Seca3g04753 351 SUPERFAMILY "Winged helix" DNA-binding domain 16 104 IPR036390 -
Seca3g04753 351 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 105 350 IPR029063 -
Seca3g04753 351 PIRSF O-mtase 3 351 IPR016461 GO:0008168
Seca3g04753 351 FunFam O-methyltransferase ZRP4 101 351 - -
Seca3g04753 351 Pfam O-methyltransferase domain 124 333 IPR001077 GO:0008171
Seca3g04753 351 Gene3D Vaccinia Virus protein VP39 100 351 IPR029063 -
Seca3g04753 351 CDD AdoMet_MTases 190 288 - -
Seca3g04753 351 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 16 351 IPR016461 GO:0008168
Seca3g04753 351 Gene3D - 4 99 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g04753 Seca-Chr3 92433468 92434706 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g04753 23 337 Monolignol Biosynthesis Gene Families AT5G54160 31.481 1.59e-49 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g04753 - K16040 gmx:100807238 432.18