Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g04745 ATGGCAAGCCTGCAGATGCAGCAACAACAACCTGAGAGTGGGAGTGATGCATCATCGAGGCCAGTTGGAGGTAGCAGCCGCATAGTAGCCCTCAATGTCACCCCTTCTAACAACCTTCTTCATAATTACGATCACGATGCCTCCTCAAAGCACAATCATCAGAATTCGGGATTAAACAATTCTAACCTTTTAGATTCTAATTCAGTTGATGATAACCCCTATGGTCCTTGGATGTTGGTTAAGAGGCAACACAAGAGGAAGACTGTGGCTGGAAAAAAAAGTAGATGCAGATCCTCTATTATTGATAAAGAAGGACCTAATTTAAACAAAGGGTCTAGATTTTCCCTTCTACAGCAGAAATCTTATGAAGAAGAAAATATTGTTGATGATGGCACTAACCAGTTAACCTCCAATTCAAGTGCTCTCAGAGTCAGAAACCCAAGTGCTGAGAAGAATACTCAGAATGTAAGTATCAGGAAAACAACACAGAAATCACAGAAACCCAAGGATAATAAATCTCAAAACCAGAGTCAGCAGAAGGAACCCCAAATTGGCAGAAAAGTCTACTGGACCTTGGAAACTGATCTGCAAGCTGGAGCTGACCATAGATATGAGGTTGCTAAGGAGCAGGCAGAGAGGAGGGCAACGGCTCTGTTGATGTTTGATTTGGGTCAGAAAGGTTATGGGAGAGGCGTGTATGGATGTGCCATTGAGTTTCTTGAAGGCGCACTCACTATCATACCCAGACCTACATTATTTGGTGGAGTGGAAACTGATATGCAAGCTGGAGCTGACCATAGATATGAGGTATTGATTGGCACAGCCTTTGCGCTTAGCATACTCTTCCATATCCCAGTATGGGCAGGAGTCCTGTTGACTGGCTTCAGCACTCTCTTGTATCTGGGTCTGCAGAGATTTGGGACAAGGCAGCCCCATTTGCAGAAGCTTGCCTGTCTCTGCATTTCTAAGGAAAGAAAAAAGAGAGCCAGAGATTCTCATTCTCAGAAAGAAGAGAGTCAGAAACCTTCCACTATTATTCGAATTCAGCTAATGGGGAGACCACCTTGCTGTGATAAAATTGGGATTAAGAAAAAGGGCCTTGGACTCCAGAGGAGGACATCATCTTGGTCTCTTACATTCAAGAACATGGACCAGGGAATTGGAGATCAGTTCCCACCAGTACAGGCTGCTATAGCATCCTATCTTCCACAGAGGACAGACAATGACATAAAAAACTACTGGGACACCCATTTAAAGAAAAAGCTGAAGAAGATGCAAAATAGGAGTGAGGATGGTCATGACAAAGAAGGACACTCTAATTCACAGGCAAAGGGTCAGTGGGAGAGAAGGCTTCTAACAGATATTCACATGCCCAAGCAAGCCTTGTGTGAGGCACTGTCCCTTGACAAGCCAACCCCAGAGACTACCACTTTGATTACCATCACTCTGTTACCAACAACGCCAAACCAAGCTTCTCCATATGCATCAAGCGCTGAGAACATAGCCCGATTGCTCGAAAACTGGATGAAGAAATCCAATTTACTCATCAACTGA 1554 0.4414 MASLQMQQQQPESGSDASSRPVGGSSRIVALNVTPSNNLLHNYDHDASSKHNHQNSGLNNSNLLDSNSVDDNPYGPWMLVKRQHKRKTVAGKKSRCRSSIIDKEGPNLNKGSRFSLLQQKSYEEENIVDDGTNQLTSNSSALRVRNPSAEKNTQNVSIRKTTQKSQKPKDNKSQNQSQQKEPQIGRKVYWTLETDLQAGADHRYEVAKEQAERRATALLMFDLGQKGYGRGVYGCAIEFLEGALTIIPRPTLFGGVETDMQAGADHRYEVLIGTAFALSILFHIPVWAGVLLTGFSTLLYLGLQRFGTRQPHLQKLACLCISKERKKRARDSHSQKEESQKPSTIIRIQLMGRPPCCDKIGIKKKGLGLQRRTSSWSLTFKNMDQGIGDQFPPVQAAIASYLPQRTDNDIKNYWDTHLKKKLKKMQNRSEDGHDKEGHSNSQAKGQWERRLLTDIHMPKQALCEALSLDKPTPETTTLITITLLPTTPNQASPYASSAENIARLLENWMKKSNLLIN. 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g04745 517 MobiDBLite consensus disorder prediction 422 445 - -
Seca3g04745 517 MobiDBLite consensus disorder prediction 40 69 - -
Seca3g04745 517 MobiDBLite consensus disorder prediction 129 184 - -
Seca3g04745 517 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 398 422 IPR017930 -
Seca3g04745 517 PANTHER ORF03 PROTEIN 118 255 - -
Seca3g04745 517 MobiDBLite consensus disorder prediction 1 22 - -
Seca3g04745 517 Gene3D - 393 450 - -
Seca3g04745 517 MobiDBLite consensus disorder prediction 83 113 - -
Seca3g04745 517 MobiDBLite consensus disorder prediction 52 69 - -
Seca3g04745 517 CDD SANT 396 418 IPR001005 -
Seca3g04745 517 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g04745 Seca-Chr3 92325311 92332630 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g04745 351 512 MYB Transcription Factor Family AT5G62470 36.364 2.79e-32 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g04745 K09422 - gmx:100807020 154.451