Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g04704 ATGAAAATTCTTCAAGATTTAGTCCCTGGTTGTAACAAGCACGTAATTGGTAAAGCATTTGTCCTGGATGAGATAATAAATTACATCCAGTCACTGCAGCGTCAGGTTGAGGTAGACATCATCTTCATCTTTCTATCTCTACTTGAGGCAGTTAATTCGAGATTGACCATGAACCCTACTATTGAATGTTTTCCATCAAAAGATGTAAGTCTATCGACTTTAGCATGTTAA 231 0.368 MKILQDLVPGCNKHVIGKAFVLDEIINYIQSLQRQVEVDIIFIFLSLLEAVNSRLTMNPTIECFPSKDVSLSTLAC. 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g04704 76 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 1 68 IPR024097 GO:0006355
Seca3g04704 76 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 2 39 IPR036638 GO:0046983
Seca3g04704 76 Gene3D - 1 38 IPR036638 GO:0046983
Seca3g04704 76 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 1 32 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g04704 Seca-Chr3 91741998 91742398 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g04704 1 71 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G59640 75.000 1.56e-25 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g04704 - - ahf:112748872 102.064