LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Seca3g04624	ATGGCAGGGCCTGGACAAGTATCTCACAGGCTTCTCGGCCTTTTGCTTTTGATGTTGCTAATTCTTATAAGCTCATCTCAAGCAAAGAAATTAGAAGTTGGTGGCAAAGATGGGTGGGTGGAGAAACCTTCTGAAGACTACAGTCACTGGGCAAAAAGAAACAGATTTCAAGTCAATGACACTCTCAATTTTAAGTACCAGAAAGGGGCTGATTCGGTTCTGGTGGTGACTAAGGAGGATTTTGATTCGTGCAATACCAAAAATCCAATAATAATGTTGATCGGTGGGGATTCTGATGTTCTACTTTACAAGTCTGGTCTCTTTTACTTCATCAGTGGTAACGTTGAACACTGCAGAAATGGTCAAAAGCTTATTGTTCTGGTTATGTCTGTTAAACAACATCACCCTGTTCCTGCTGCACCACCGTCTGAGCCACCGGCCACCGGGTTGCAGCCAGCTCCGAGAATTCGCTCTATTAATACTCCGGCGCCGTCTCCTTCAGGCTCATCAAGGCTTGGTGTGGGTTTCGGTTTCGGTTTGGGTTTGGTTGTTGGGGTTGTTATGCTCTTCAAAGGCTTTGCAGGGCTTGTTTAG	594	0.4545	MAGPGQVSHRLLGLLLLMLLILISSSQAKKLEVGGKDGWVEKPSEDYSHWAKRNRFQVNDTLNFKYQKGADSVLVVTKEDFDSCNTKNPIIMLIGGDSDVLLYKSGLFYFISGNVEHCRNGQKLIVLVMSVKQHHPVPAAPPSEPPATGLQPAPRIRSINTPAPSPSGSSRLGVGFGFGLGLVVGVVMLFKGFAGLV.	198

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Seca3g04624	197	MobiDBLite	consensus disorder prediction	154	168	-	-
	Seca3g04624	197	Pfam	Plastocyanin-like domain	39	122	IPR003245	GO:0009055
	Seca3g04624	197	FunFam	Early nodulin-like protein 1	28	133	-	-
	Seca3g04624	197	CDD	OsENODL1_like	29	129	IPR041846	-
	Seca3g04624	197	ProSiteProfiles	Phytocyanin domain profile.	29	130	IPR003245	GO:0009055
	Seca3g04624	197	SUPERFAMILY	Cupredoxins	28	129	IPR008972	-
	Seca3g04624	197	Gene3D	-	27	133	IPR008972	-
	Seca3g04624	197	PANTHER	BLUE COPPER PROTEIN	30	136	IPR039391	GO:0009055
	Seca3g04624	197	MobiDBLite	consensus disorder prediction	137	168	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Seca3g04624	Seca-Chr3	90208819	90210016	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Seca3g04624	12	166	Phytocyanin Superfamily	AT4G28365	50.000	4.07e-48	154

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Seca3g04624	-		-	gmx:100778867	192.586