Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g04620 ATGGAGCATCTCTTTCCCTTCCTTTTATTTTCATTCAGTTTCATCCTTTTCCTCTCACAATTTCTGAAAGTGGGAAAAAGATTCAAGGTCACAGCCAAAGCACAGAACAACCTCCCCCCTGGGCCATGGAAGCTTCCTATCATTGGAAGCATCCACCACTTGATTACCACTCTACCCCATCACCGCTTGAGAGAACTAGCCCAAACATATGGCCCTGTGATGCACCTAAAACTTGGTGAGGTATCAACCATTGTGTTTTCTTCTCCTGAAGTTGCCAAAGAGGTGTTGAAAACCTATGATGCCATCTTTGCTCAAAGGCCTCATCAAGTTGGTGCAGACATCATGTGTTATGGTTCCACTGACATTGCCACTGCCCCATATGGAGGTTATTGGAAGCAGCTAAGAAGAATATGCTCATTAGAGCTTCTTGGTCCTAAACGTGTGAGATCATTCCAATCAATTAGAGAACAAGAGGTATCCAATTTCATAAGATATATTTCTAATAACATTGGATGTTCTGTGAATCTCAGTGAAAAGGTGGCTTTCATGACAAGTGCCATTATTGCAAGAGCAGCTTTTGGTAGAACATGCAAGGACCAACAAGTGTTCATTTCCTTGATCAAGAAACTTGTGAGAATGGCTGAAGGTTTGATCGTTCTTGATCTATTCCCTTCTCAAAAGTGGCTTCATTTGATCAGTGGAACCAAGCCTAAACTAGAAGAGTTGCATAGAAATTTTGATATAATCCTTGAAAACATCATCAGAGAGGTAGTGACAGAGAAGGGTAGTGAAGGTGAACTAGAGGGTCTTCTCTCTGTTCTTCTAAATATTAAAGATTATGATGATGCCCTTGAATATCCCTTAACAATAGACAACATCAAAGCTGTAATTTTTGACTTATTTGTTGCTGGAAGTGATACAACATCTACAGTTATAGTATGGGCCATTTCAGAGATGCTGGAAAACCCAAGAGTGATGATCAGAGCTCAAGAGGAAGTTAGAAAAGTTTTTGGGAGCAAAGGGTACACAGACCCAGCAGCTCTTCAAGAACTAGAATATCTGAAAGCGGTTATCAAAGAAACACTGAGATTACACCCTCCTTTTCCTCTGCTTCTCCCAAGAGAGTGCAGAGAAACTTGTGAGATTAAAGGGTACACAATACCTGCTGGAACCAAAGTGATAGTGAATGCATGGGCAATTGGAAGAGACCCGGAGTATTGGAGTGAAGCAGAGAAGTTTTGTCCAGAGAGGTTCCTTGATTGTTCAATTGATTACAAGGGTTCCAATATTGAGTTCATACCTTTTGGTGCAGGAAGGAGAATATGTCCAGGCATTTTGTTTGGTATATCAAGCATTGAACTTTCTCTTGCACAACTGCTTTACTATTATAATTGGGAACTTCCCAGTGGAAAAAAGGAAAGCCTAGATATGACTGAAGCTTTGGGATCCTCATCAAGAAGGAAAATAGATCTCATCGCAGTTCCCATTTCTTACAATCCTGATCCTGTTTCATAA 1515 0.4066 MEHLFPFLLFSFSFILFLSQFLKVGKRFKVTAKAQNNLPPGPWKLPIIGSIHHLITTLPHHRLRELAQTYGPVMHLKLGEVSTIVFSSPEVAKEVLKTYDAIFAQRPHQVGADIMCYGSTDIATAPYGGYWKQLRRICSLELLGPKRVRSFQSIREQEVSNFIRYISNNIGCSVNLSEKVAFMTSAIIARAAFGRTCKDQQVFISLIKKLVRMAEGLIVLDLFPSQKWLHLISGTKPKLEELHRNFDIILENIIREVVTEKGSEGELEGLLSVLLNIKDYDDALEYPLTIDNIKAVIFDLFVAGSDTTSTVIVWAISEMLENPRVMIRAQEEVRKVFGSKGYTDPAALQELEYLKAVIKETLRLHPPFPLLLPRECRETCEIKGYTIPAGTKVIVNAWAIGRDPEYWSEAEKFCPERFLDCSIDYKGSNIEFIPFGAGRRICPGILFGISSIELSLAQLLYYYNWELPSGKKESLDMTEALGSSSRRKIDLIAVPISYNPDPVS. 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g04620 504 PRINTS P450 superfamily signature 356 367 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g04620 504 PRINTS P450 superfamily signature 303 320 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g04620 504 PRINTS P450 superfamily signature 433 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g04620 504 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 435 444 IPR017972 GO:0005506|GO:0016705
Seca3g04620 504 SUPERFAMILY Cytochrome P450 39 491 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g04620 504 PANTHER CYTOCHROME P450 71B11-RELATED 19 496 - -
Seca3g04620 504 CDD CYP71-like 69 491 - -
Seca3g04620 504 Pfam Cytochrome P450 39 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g04620 504 Gene3D Cytochrome P450 31 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g04620 504 FunFam Cytochrome P450 99A2 28 496 - -
Seca3g04620 504 PRINTS E-class P450 group I signature 442 465 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g04620 504 PRINTS E-class P450 group I signature 312 338 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g04620 504 PRINTS E-class P450 group I signature 355 373 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g04620 504 PRINTS E-class P450 group I signature 396 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g04620 504 PRINTS E-class P450 group I signature 292 309 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g04620 504 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g04620 504 PRINTS E-class P450 group I signature 432 442 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca3g04620 504 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g04620 Seca-Chr3 90170057 90171751 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g04620 39 498 Cytochrome P450 AT3G26330 40.299 1.99e-119 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g04620 - K23807 gmx:100779851 712.605