Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g04618 ATGTTCAGAGTCGACGCTGCCAGTGCTCGTCGTGAAGCCAATGTCCTTAACCACCTCAACTATCTCGACCAACACTTAGCTATAGAATCTTTGATCTACGACAACTTTCTCAATCTCCAATCTTCCTTCCTCCTCTTCCGGTGGCTCCGCAGCCGAGGCATCGTCAGAGAAGGAAAGAAGCTAGAAAAGTCTGAAGTTCTCAATGAATCGATTCGATTGTGGAAAGATTTTGGGGGCTTGCATATGCCGCTGTTCAAATATAATCTCAACAAACTTCTCTTTATAGATTCACTGGCACCTGATACCATTCCTCTATCTTCATATGAGGAAACATTGAATGCAGACCTACCTACAATCCCATTAATTACAATTCTACAGAGTATTGGTAACTTTTCAGACAAATCTAAATTAGGGGCAGGTGGATTTGGCCCCGTTTACAAGGCTTATGTAGAATATGAGACAGCAAAGAGGCACTATGCCTGTGTTGATTGCCCAGGACATGCAGACTATGTTAAGAACATGATAACCGGAGTTGCGCAAATGGATGGTGGAATCCTTATGGTTTCTGCTCCAGATGGACCAATGCCTCAAACGAAAGAACATATACTTCTTGCTCGTCAGATAAATTGA 630 0.4286 MFRVDAASARREANVLNHLNYLDQHLAIESLIYDNFLNLQSSFLLFRWLRSRGIVREGKKLEKSEVLNESIRLWKDFGGLHMPLFKYNLNKLLFIDSLAPDTIPLSSYEETLNADLPTIPLITILQSIGNFSDKSKLGAGGFGPVYKAYVEYETAKRHYACVDCPGHADYVKNMITGVAQMDGGILMVSAPDGPMPQTKEHILLARQIN. 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g04618 209 PANTHER ELONGATION FACTOR TU-RELATED 148 206 - -
Seca3g04618 209 PRINTS GTP-binding elongation factor signature 176 187 IPR000795 GO:0003924|GO:0005525
Seca3g04618 209 PRINTS GTP-binding elongation factor signature 160 170 IPR000795 GO:0003924|GO:0005525
Seca3g04618 209 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 148 208 IPR027417 -
Seca3g04618 209 Pfam Elongation factor Tu GTP binding domain 148 207 IPR000795 GO:0003924|GO:0005525
Seca3g04618 209 Gene3D - 145 209 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g04618 Seca-Chr3 90128758 90131066 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g04618 154 202 Eukaryotic Initiation Factors Gene Family AT4G18330 46.000 1.23e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g04618 K02358 - apan:127242885 120.938