Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g04610 ATGAAAATCCTCTACTCCAAACTCAACTCTCTTCTCCCTAACTACAACCCCAAGGGATTAATTATTATTTTAATTAGGAAGCACTGCCACTGCCTGACCAAGTGGATAAAGAGCTTAGAGGAAAGGGTGAAGATGGCTCAACAGAAGAAAGACACCTTACTGCCACTGCGAACCAATAACAATAAGAGATCCCGTGGTGGTAGTAGTAACTGCTCTGCCTTCCCACAACTTGAGATTCACCAAATGGGTTCCACTTTGGAAGTTGTTCTGACATGTGGTTCAGATAACCAGTTCGTTTTCCATGAAATCATTCGAATACTACATGAAGACAACATTCACATCAGGACTGCCAATTCCTCAATGGCTGCGGATCATTCCGTGCTTCATGTTCTGCATGCAGAGATTCCGCAATCTTCACTTCAATTTGGAGCAACCAAAGTGAGTGAGAGATTGAAAAGGTTTGTGAATGGATCCTCCAGCGATGTGGAAATCGAAATACAGCCCGAATTGTGGGATTTTCAAATTCCTACTCATATCTGGGGTTAA 546 0.4267 MKILYSKLNSLLPNYNPKGLIIILIRKHCHCLTKWIKSLEERVKMAQQKKDTLLPLRTNNNKRSRGGSSNCSAFPQLEIHQMGSTLEVVLTCGSDNQFVFHEIIRILHEDNIHIRTANSSMAADHSVLHVLHAEIPQSSLQFGATKVSERLKRFVNGSSSDVEIEIQPELWDFQIPTHIWG. 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g04610 181 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 1 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g04610 Seca-Chr3 90038676 90039362 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g04610 1 157 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 28.743 6.88e-10 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g04610 - - gmx:100817883 203.371