Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g04585 ATGTTCCAGTCTTACCACTGCAAATGGTTGTGGCCAACCCCATTGTCTCATAGGCAGAAAGCCTCCTCACCTGCAATTGAATGTGGCGAACCAAGCCTTGATTGGCCAAGCCAGTTGAAGATTGTGAAAGGCATAGCAAAAGGTCTTGAATATCTATACAAGGAGATGCCAAGCCTAATTACGCCCTGTAGTCATCTTAAATCCTCCAACGTTCTTCTAAGTGAGAATTTGGAGCCAATTCTCAATGACTATGGGTTTGTACCAATGATAAACCAGGATCTTGCTCATGACATCATGGTGATCTACAAGTCCCCAGAGTATTTGCAGCATGGCCGTGTTACAAAGAAGACATATGTGTGGAGTCTTGGGATACTGATTTTGAACAAGAAGGAAGAGATCATCAATGACCTTGTTAAGTTCAGAAATGGGAAGGATTATTATGCCAAGATTGGGAAGGCTTGGAAACGTGGCTATTTATTCTATGGTCCTCCAGGGACTGTTAAGTCTACAATGATAGCTGCTATGAGGCAATCTGTGACTGCCCCTAGTTCTGGGGACTTTGATGCAAATGGGTTTGTAGATAGTGTTATCAACTTTGCAACAGAGAACCCTGCAATTCTTGCTGGAGGAGTGGCTATTTTGGCTATTTTTGGCTATGAAGCATTTGAAAGGATAACATTCTATGGAGTTGCTTCCAACTTGGTCAATTACCTCACAACTCAACTCCATGAGGACACTGTTTCATCACTGAGGAATGTCAATAACTGGTCAGGATCTGTTTGGATAACACCAATTCTTGGAGCTTACATAGCACATGGAGATCAATGTCTTACATAG 837 0.4241 MFQSYHCKWLWPTPLSHRQKASSPAIECGEPSLDWPSQLKIVKGIAKGLEYLYKEMPSLITPCSHLKSSNVLLSENLEPILNDYGFVPMINQDLAHDIMVIYKSPEYLQHGRVTKKTYVWSLGILILNKKEEIINDLVKFRNGKDYYAKIGKAWKRGYLFYGPPGTVKSTMIAAMRQSVTAPSSGDFDANGFVDSVINFATENPAILAGGVAILAIFGYEAFERITFYGVASNLVNYLTTQLHEDTVSSLRNVNNWSGSVWITPILGAYIAHGDQCLT. 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g04585 278 Gene3D - 127 214 IPR027417 -
Seca3g04585 278 ProSiteProfiles Protein kinase domain profile. 1 222 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca3g04585 278 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 124 177 IPR027417 -
Seca3g04585 278 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 30 128 IPR046959 -
Seca3g04585 278 Pfam Protein kinase domain 40 128 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca3g04585 278 Gene3D Transferase(Phosphotransferase) domain 1 22 126 - -
Seca3g04585 278 Gene3D MFS general substrate transporter like domains 215 273 IPR036259 -
Seca3g04585 278 SUPERFAMILY Protein kinase-like (PK-like) 32 127 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g04585 Seca-Chr3 89636791 89640620 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g04585 29 127 Receptor kinase-like Gene Family AT5G35390 65.657 1.54e-39 144
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Seca3g04585 Pkinase 1.3e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g04585 - - lja:Lj2g3v0914400.1 169.859