Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca3g04584 ATGGATTCCATCCTCCTTCGCCTTCTCAGAACAACAACATCTAGTGGGACTCTCTTGGATGGGCGAATGTATATATATATTGAAGAGTTGATCAGTTCCTACAAGACTGTGCTAAGGGAGGGAACTACTATCACTATGGTTGGGAAGGCCATGCTGATGGCATCCAATTATGAAGAAATCTGGCCCCCAAAGGTGAGGAGGCTTTCTGCCTATGAGACAATGGGGTTGGCCACAACCATTTGCAGTGGTAAGACTGGAACATTGACTATGAATCAGATCCAATTCCTTAATTCGAGGTTGGTGACTATGTGGCGTATAATAATGAGAAGGAGGGGATCATTGACTGTAAGTCTATAG 357 0.4426 MDSILLRLLRTTTSSGTLLDGRMYIYIEELISSYKTVLREGTTITMVGKAMLMASNYEEIWPPKVRRLSAYETMGLATTICSGKTGTLTMNQIQFLNSRLVTMWRIIMRRRGSLTVSL. 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca3g04584 118 Gene3D - 78 90 IPR023214 -
Seca3g04584 118 Gene3D - 65 77 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca3g04584 Seca-Chr3 89635225 89645570 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca3g04584 65 98 Primary Pumps ATPases AT5G57110 73.529 4.00e-09 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca3g04584 K01537 - sly:101265214 54.299